We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 6Q05 | 2020 | 21 |
| 7LY3 | 2021 | 21 |
| 7LXY | 2021 | 21 |
| 3LAA | 2010 | 21 |
| 7JZM | 2020 | 21 |
| 7N8H | 2021 | 20 |
| 3UAM | 2011 | 20 |
| 3V7O | 2012 | 20 |
| 3P96 | 2010 | 19 |
| 6WS6 | 2020 | 18 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3meq | - | http://www.springerlink.com/index/y386x24r70618558.pdf | Asymmetric reduction of diketones by two Gluconobacter oxydans oxidoreductases | 2012 | P Schweiger, H Gross, J Zeiser? - Applied Microbiology and Biotechnology, 2012 - Springer | ... identity, >70 % similarity) to other alcohol dehydrogenase with known 3-D structure, for example, to zinc-dependent alcohol dehydrogenases from Brucella suis (PDB, 3MEQ_A), Pseudomonas ... 2004), 3MEQ from B. suis, and 1RJW from G. stearthermophilus (Ceccarelli et al. ... |
| 2 | 3py6 | - | http://www.springerlink.com/index/W2W04L2272052KUW.pdf | Cation-PI Interactions in beta-Lactamases: The Role in Structural Stability | 2012 | P Lavanya, S Ramaiah, A Anbarasu - Cell biochemistry and biophysics, 2012 - Springer | ... 3PY6-A K37?Y263 -5.33 -1.41 -6.74 K231?W228 -8.02 -1.66 -9.68 2G2W-A R266?F66 -1.62 -1.06 -2.71 R259?W290 -7.01 -4.74 -11.75 K34?W60 -2.81 -0.75 -3.56 Cell Biochem Biophys 123 Page 3. Table 1 continued PDB ID Cation?p interacting residues ... |
| 3 | 4dz6 | - | http://www.springerlink.com/index/U317127747468386.pdf | Reflections on biocatalysis involving phosphorus | 2012 | GM Blackburn, MW Bowler, Y Jin, JP Waltho - Biochemistry (Moscow), 2012 - Springer | ... Moreo v er , kindred results can be deriv ed fro m metav ana - date co mplexes, as for the recent structure of a nucleoside diphosphate kinase with ADP linked through v anadate to His134. This show s O–P–N distance of 4.48 Å and an angle of 172.11° (PDB: 4DZ6) ... |
| 4 | 3la9 | - | http://www.springerlink.com/index/M46X0Q11002X8755.pdf | Structure and biology of trimeric autotransporter adhesins | 2011 | A ?yskowski, JC Leo, A Goldman - Bacterial Adhesion, 2011 - Springer | ... The structures are identified by their PDB ID codes where avail- able. ... structure of Haemophilus HiaDB2; (c) 3emi: structure of Haemophilus Hia 307?442 non-adhesive domain; (d) 3emo: structure of transmembrane domain of Haemophilus Hia 973?1098; (e) 3la9: structure of ... |
| 5 | 2kwl | - | http://www.springerlink.com/index/M12W411064181762.pdf | Combining NMR ensembles and molecular dynamics simulations provides more realistic models of protein structures in solution and leads to better chemical shift prediction | 2012 | J Lehtivarjo, K Tuppurainen, T Hassinen? - Journal of biomolecular NMR, 2012 - Springer | ... enough. Furthermore, in the static structure of the acyl carrier protein from Borrelia burgdorferi (PDB 2KWL) there are two large 13Ca shift prediction errors (E37Ca, 3.92 ppm and I61Ca, -3.08 ppm) in the loop regions. When ... |
| 6 | 3ngj | - | http://www.springerlink.com/index/M06H55885X675605.pdf | Characterization and application of a newly synthesized 2-deoxyribose-5-phosphate aldolase | 2013 | ZY You, ZQ Liu, YG Zheng, YC Shen - Journal of industrial microbiology & Biotechnology, 2013 - Springer | ... The crystal structures of DERAs from Entamoeba histolytica (PDB accession NO. 3NGJ) and Thermotoga maritima (PDB accession NO. 3R12) were used as templates. ... 3NGJ, resolution 1.70 A?) and Thermotoga maritima (54.3 % identity; PDB accession no. ... |
| 7 | 3l56 | - | http://www.springerlink.com/index/L53174W7H2780715.pdf | Molecular mechanisms of transcription and replication of the influenza A virus genome | 2011 | S Zhang, T Toyoda - Frontiers in Biology, 2011 - Springer | ... (b) The electrostatic potential of PB2 3/3 E627 was calculated using the GRASP program. Modified from Fig. 2 of Kuzuhara et al. (2009b). G: PB2 C-terminal NLS. PDB accession number:3L56. Figures were rendered in PyMOL (http://www.pymol.org/). ... |
| 8 | 3fs2 | - | http://www.springerlink.com/index/E576207H464067U5.pdf | In silico quest for putative drug targets in Helicobacter pylori HPAG1: molecular modeling of candidate enzymes from lipopolysaccharide biosynthesis pathway | 2012 | M Sarkar, L Maganti, N Ghoshal, C Dutta - Journal of molecular modeling, 2012 - Springer | ... Fig. 7 Sequence alignment of 2-dehydro-3-deoxyphosphoocto- nate aldolase of H. pylori HPAG1 with template proteins from Aquifex aeolicus (PDB id: 1fx6), Haemophilus influenza (PDB id: 1o60) and Brucella melitensis (PDB id: 3fs2). ... |
| 9 | 3cez | - | http://www.springerlink.com/index/E032J772125W08T2.pdf | 1 H, 13 C and 15 N resonance assignment of a zinc-binding methionine sulfoxide reductase type-B from the thermophilic archeabacterium Methanothermobacter thermoautotrophicus | 2010 | M Carella, O Ohlenschl?ger, R Ramachandran? - Biomolecular NMR Assignments, 2010 - Springer | ... 2) as predicted from chemical shifts by using TALOS+ (Shen et al. 2009) are in close agreement with the ones present in other known MSRB structures (eg PDB 3HCJ, 3CEZ, 1L1D). The 13Ca and 13Cb chemical shifts suggested (Kornhaber et al. ... |
| 10 | 3gvg | - | http://www.springerlink.com/index/C7W2222G6X226326.pdf | Triosephosphate isomerase: a highly evolved biocatalyst | 2010 | RK Wierenga, EG Kapetaniou, R Venkatesan - Cellular and molecular life Sciences, 2010 - Springer | ... 1AW2 M. marina No SO4 Dimer 2.65 20.0 21.9 3GVG M. tuberculosis No Dimer 1.55 14.5 16.9 1R2R O. cuniculus No Dimer 1.5 16.1 19.0 ... 3967 Page 8. Table 1 continued pdb code Source Mutant Active site ligand Oligomeric state Resolution (A? ) Rcryst (%) Rfree (%) ... |