We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 3O0M | 2010 | 11 |
| 3EK2 | 2008 | 11 |
| 3EK1 | 2008 | 11 |
| 4LGV | 2013 | 11 |
| 4G50 | 2012 | 11 |
| 6Q06 | 2020 | 11 |
| 3K2H | 2009 | 11 |
| 3I3R | 2009 | 11 |
| 4DLP | 2012 | 11 |
| 5CY4 | 2015 | 10 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3dmo | - | http://www.sciencedirect.com/science/article/pii/S1047847709003463 | Structural and functional analyses of< i> Mycobacterium tuberculosis Rv3315c</i>-encoded metal-dependent homotetrameric cytidine deaminase | 2010 | ZA S?nchez-Quitian, CZ Schneider, RG Ducati? - Journal of structural Biology, 2010 - Elsevier | ... in the PDB (3IJF). Fig. 7A and B show two views of the canonical homotetrameric structure observed for CDAs from S. cerevisiae (1R5T), B. subtilis (1UX1, 1UWZ, 1UX0, 1JTK), Mus musculus (1ZAB, 2FR5, 2FR6), Bacillus anthracis (2D30), Burkholderia pseudomallei (3DMO), ... |
| 2 | 3nxs | - | http://www.sciencedirect.com/science/article/pii/S1046592813002568 | Strategies for purifying variants of human rhinovirus 14 2C protein | 2014 | T S?ra, R Konrat, T Skern - Protein expression and purification, 2014 - Elsevier | ... Score, Entry name, PDB identifier. 6198, Human nuclear valosin containing protein like (Nvl), C-terminal AAA?ATPase domain, 2X84. ... 2887, Crystal structure of LAO/AO transport system from Mycobacterium smegmatis bound to GDP, 3NXS. ... |
| 3 | 3ijp | - | http://www.sciencedirect.com/science/article/pii/S1046592812001878 | Comparative Structure and Function Analyses of Native and His-Tagged forms of Dihydrodipicolinate Reductase from Methicillin-Resistant Staphylococcus aureus | 2012 | C Dogovski, SR Dommaraju, LC Small? - Protein Expression and Purification, 2012 - Elsevier | ... of DHDPR from five bacterial species have been determined by X-ray crystallography, namely from E. coli [25] and [26] (PDB ID: 1ARZ), M. tuberculosis[27] (PDB ID: 1C3V), T. maritima (PDB ID: 1VM6), Bartonella hensalae (PDB ID: 3IJP) and more recently from S. aureus COL ... |
| 4 | 3m1x | - | http://www.sciencedirect.com/science/article/pii/S1046202315002078 | Protein structure prediction guided by crosslinking restraints–A systematic evaluation of the impact of the crosslinking spacer length | 2015 | T Hofmann, AW Fischer, J Meiler, S Kalkhof - Methods, 2015 - Elsevier | ... Based on the structure of calmodulin (PDB entry 2ksz) the average Cβ–Nz, Cβ–Cγ, Cβ–Cδ,Cβ–N H2 , and Cβ–S G distances ... Structure, Uniprot, Resolution [Å], Molecular weight [Da],Sequence length [aa], Lys portion [%], α-helix [%], β-sheet ... 3m1x, C4LXT9, 1.2, 15882, 138, 7, ... |
| 5 | 3rd5 | - | http://www.sciencedirect.com/science/article/pii/S1011134416302433 | Multiple active site residues are important for photochemical efficiency in the light-activated enzyme protochlorophyllide oxidoreductase (POR) | 2016 | BRK Menon, SJO Hardman, NS Scrutton - of Photochemistry and , 2016 - Elsevier | ... A putative uncharacterized SDR protein (PDB id: 3RD5) that has the highest sequence identitywith POR was used as the reference structure and the sieving procedure removed 68% of the3RD5 residues at 1.8 sieving level using Mustang-MR sieving server. ... |
| 6 | 4hec | - | http://www.sciencedirect.com/science/article/pii/S0969212614000744 | Structure and Function of RNase AS, a Polyadenylate-Specific Exoribonuclease Affecting Mycobacterial Virulence In Vivo | 2014 | M Romano, R van de Weerd, FCC Brouwer - Structure, 2014 - Elsevier | ... Structural features of the enzyme resemble those of an independently determined structure reported in the Protein Data Bank while our functional characterization was ongoing (PDB code 4HEC) (Abendroth et al., 2014). ... |
| 7 | 3uf8 | - | http://www.sciencedirect.com/science/article/pii/S0969212613004255 | Structure and Self-Assembly of the Calcium Binding Matrix Protein of Human Metapneumovirus | 2014 | C Leyrat, M Renner, K Harlos, JT Huiskonen? - Structure, 2013 - Elsevier | ... HMPV M was solved at 2.8 ? resolution by molecular replacement using the structure of RSV M (Protein Data Bank ID [PDB ID] 2VQP; sequence identity, 38%). Data collection and refinement statistics are given in Table 1 (R work = 0.19; R free = 0.23). Table 1. ... |
| 8 | 4f3p | - | http://www.sciencedirect.com/science/article/pii/S0969212613002700 | Functional Diversity of Tandem Substrate-Binding Domains in ABC Transporters from Pathogenic Bacteria | 2013 | F Fulyani, GK Schuurman-Wolters, AV Zagar, A Guskov… - Structure, 2013 - Elsevier | Supplemental Information ... unliganded liganded 1 42 glnH Escherichia coli Gln v v 1.94 1GGG, 1WDN 0.5 µM (Hsiao, et al., 1996) 2 38 glnH Burkholderia pseudomallei Gln v 2.4 4F3P nd Abendroth J, 2012 ... |
| 9 | 3uam | - | http://www.sciencedirect.com/science/article/pii/S0969212612001426 | Structural Basis for Substrate Targeting and Catalysis by Fungal Polysaccharide Monooxygenases | 2012 | X Li, WT Beeson, CM Phillips, MA Marletta, JHD Cate - Structure, 2012 - Elsevier | ... database (Protein Data Bank [PDB]) contains crystal structures of three CBM33 members, including S. marcescens CBP21 (PDB entry 2BEM) (Vaaje-Kolstad et al., 2005) and two other CBM33s (from Burkholderia pseudomallei and Vibrio cholera, PDB entries 3UAM and 2XWX ... |
| 10 | 3ek2 | 3k2e, 3grk | http://www.sciencedirect.com/science/article/pii/S096921261200130X | < i> Staphylococcus aureus</i> FabI: Inhibition, Substrate Recognition, and Potential Implications for In Vivo Essentiality | 2012 | J Schiebel, A Chang, H Lu, MV Baxter, PJ Tonge? - Structure, 2012 - Elsevier | ... bacteria harbor an alanine at this position and, thus, lack the required hydrogen bond acceptor (Figure 3). Consistently, all structurally characterized FabIs from gram-negative organisms contain just a single flexible SBL (PDB codes 2JJY, 2P91, 2WYU, 3EK2, 3GRK, and 3K2E ... |