We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 7LUY | 2021 | 0 |
| 7LTQ | 2021 | 0 |
| 7LL6 | 2021 | 0 |
| 7LDA | 2021 | 0 |
| 7LD8 | 2021 | 2 |
| 7LBJ | 2021 | 0 |
| 7LA1 | 2021 | 0 |
| 7L9U | 2021 | 0 |
| 7L9T | 2021 | 0 |
| 7L9R | 2021 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 6tz8 | - | https://www.currentscience.ac.in/data/forthcoming/206.pdf | Uneditedversion published onlineon 15/7/2021 | 2021 | G Biswas, R Banerjee - currentscience.ac.in | exclusively with P2, while P1 mediates molecular recognition and binding, as evident from the crystal structures of (truncated) SurA-peptide complexes46 The crystal structure of CaEss1 showed structural similarity to the human PIN1 protein except for the |
| 2 | 6tz8 | - | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7669531/ | Current Challenges and Opportunities in Designing ProteinProtein Interaction Targeted Drugs | 2020 | WH Shin, K Kumazawa, K Imai- and Applications in, 2020 - ncbi.nlm.nih.gov | Phase Reached*, Modality*, Drug PDB ID**, Drug-Protein PDB ID*, Target PPI PDB ID binding protein 1A inhibitor, Inhibitor, Approved (1994), Small molecule, FK5, 1BKF, 6TZ8 (FKBP12/CNA 2.8 resolution by cryo-electron microscopy (cryo-EM).65 The cryo-EM structure revealed ... 6TZ8 (FKBP12/CNA/CNB) (C. neoformans) |
| 3 | 6tz8 | - | https://journals.plos.org/plospathogens/article?id=10.1371/journal.ppat.1011056 | Natural product ligands of FKBP12: Immunosuppressive antifungal agents FK506, rapamycin, and beyond | 2023 | A Rivera, J Heitman- PLoS pathogens, 2023 - journals.plos.org | adapted from Harnessing calcineurin-FK506-FKBP12 crystal structures from invasive fungal pathogens to develop antifungal agents ( PDB 6TZ8 ) [3]. The original figure was published |
| 4 | 6tys | - | https://www.biorxiv.org/content/10.1101/2021.07.09.451785.abstract | Study of Basic Local Alignment Search Tool (BLAST) and Multiple Sequence Alignment (Clustal-X) of Monoclonal mice/human antibodies | 2021 | IV Ferrari, P Patrizio- bioRxiv, 2021 - biorxiv.org | zone between 150-210 residues amino acids; with the exception of ID PDB 3I9G-3W9D 6TYS : (A potent cross-neutralizing antibody targeting the fusion glycoprotein inhibits Nipah virus and Antibodies all have the same basic structure consisting of two heavy and two light |
| 5 | 6tys | - | https://www.mdpi.com/1999-4915/12/3/342 | Structural insight into paramyxovirus and pneumovirus entry inhibition | 2020 | M Aggarwal, RK Plemper- Viruses, 2020 - mdpi.com | 19,20,21] have furthermore created a novel opportunity for structure -informed mechanistic Structural information is very limited compared to that available for the paramyxovirus attachment Consequently, crystal structures of prefusion PIV5 and NiV F ectodomains could only be |
| 6 | 6tys | 7ki6, 7ki4 | https://www.nature.com/articles/s41467-023-39278-8 | Structure and antigenicity of divergent Henipavirus fusion glycoproteins | 2023 | A Isaacs, YS Low, KL Macauslane, J Seitanidou- Nature, 2023 - nature.com | -EM structures from this work also display clear fusion peptide loop densities, which were only previously seen in structures determined by X-ray crystallography for NiV F ( PDB 5EVM & |
| 7 | 6tys | - | https://repositorio.ufopa.edu.br/jspui/handle/123456789/332 | Planejamento de protenas imunognicas multi-eptopo visando o desenvolvimento de uma vacina de nova gerao para a infeco do vrus Nipah | 2020 | JMP GALCIO - 2020 - repositorio.ufopa.edu.br | -defensin adjuvants were also added to the structural models to increase immunogenicity The interactions between each predicted epitope and MHC-I and MHC- II structures were also analyzed, using molecular modeling P Fosfoprotena PDB Protein Data Bank |
| 8 | 6q09 | - | https://pubs.acs.org/doi/abs/10.1021/acsomega.0c03338 | Correlation of Conservation of Sequence and Structures of Mycobacterial Hemerythrin-like Proteins with Evolutionary Relationship and Host Pathogenicity | 2020 | Z Ma, ML Caldas Nogueira, DP Marchi-Salvador- ACS, 2020 - ACS Publications | Journal Logo. Correlation of Conservation of Sequence and Structures of Mycobacterial Hemerythrin-like Proteins with Evolutionary Relationship and Host Pathogenicity. Zhongxin Ma Zhongxin Ma. Burnett School of Biomedical |
| 9 | 6q09 | - | https://www.sciencedirect.com/science/article/pii/S0003986121001673 | Diversity of structures and functions of oxo-bridged non-heme diiron proteins | 2021 | MLC Nogueira, AJ Pastore, VL Davidson- Archives of Biochemistry and, 2021 - Elsevier | Archives of Biochemistry and Biophysics. Diversity of structures and functions of oxo-bridged non-heme diiron proteins. ... Fig. 3. Examples of the different combinations of amino acid residues that coordinate the irons in hemerythrin-like proteins. A. HLP from Mycobacterium kansasii with 4H/2E/1Y coordination (PDB entry 6Q09) |
| 10 | 6q07 | - | https://www.ncbi.nlm.nih.gov/pmc/articles/pmc8219949/ | In-Silico evidence for a two receptor based strategy of SARS-CoV-2 | 2021 | E Milanetti, M Miotto, L Di Rienzo- Frontiers in molecular, 2021 - ncbi.nlm.nih.gov | Complex between MERS spike protein and sialic acid: PDB code 6Q07 Unbound SARS-CoV spike protein: PDB code 6CRV We use DMS (Richards, 1977) to compute the solvent accessible surface for all proteins structure , given their x-ray structure in PDB format (Berman et al |