We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 6W15 | 2020 | 0 |
| 6W2O | 2020 | 0 |
| 6W6A | 2020 | 0 |
| 6W80 | 2020 | 0 |
| 6WBD | 2020 | 0 |
| 6WFM | 2020 | 0 |
| 6WHJ | 2020 | 0 |
| 6WOM | 2020 | 0 |
| 6WQM | 2020 | 0 |
| 7TMB | 2022 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3qh4 | 3s4k | http://www.sciencedirect.com/science/article/pii/S1286457912002110 | Cytosolic lipid inclusions formed during infection by viral and bacterial pathogens | 2012 | M Stehr, AA Elamin, M Singh - Microbes and Infection, 2012 - Elsevier | ... Furthermore the three-dimensional structures of the esterases Rv0045c (PDB 3P2M) [48], Rv1847 (PDB 3S4K), and LipW (3QH4) from M. tuberculosis have been determined, but unfortunately it is not known whether these enzymes are involved in TAG hydrolysis. 5.5. ... |
| 2 | 4iuj | 4p9a, 3r2v, 3khw | http://www.ingentaconnect.com/contentone/ben/cdth/2017/00000012/00000002/art0000... | Current Drug Design Strategies for Fighting Against Swine Influenza | 2017 | M Alam, S Nandi- Current Drug Therapy, 2017 - ingentaconnect.com | ... In-silico docking studies are at the fore front of structure based screening and designing of emerg- ing anti-swine ... PDB IDs of Crystal Structures ... 5D8U, 5D9J, 5DEB, 5DES, 5I13, 5CXR, 5FDD, 5FDG, 4ZQQ, 4ZHZ, 4ZI0, 4YYL, 4W9S, 4P9A, 4MK1, 4MK2, 4MK5, 4IUJ , 4F7M, 4AWK ... |
| 3 | 6tz8 | - | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7669531/ | Current Challenges and Opportunities in Designing ProteinProtein Interaction Targeted Drugs | 2020 | WH Shin, K Kumazawa, K Imai- and Applications in, 2020 - ncbi.nlm.nih.gov | Phase Reached*, Modality*, Drug PDB ID**, Drug-Protein PDB ID*, Target PPI PDB ID binding protein 1A inhibitor, Inhibitor, Approved (1994), Small molecule, FK5, 1BKF, 6TZ8 (FKBP12/CNA 2.8 resolution by cryo-electron microscopy (cryo-EM).65 The cryo-EM structure revealed ... 6TZ8 (FKBP12/CNA/CNB) (C. neoformans) |
| 4 | 5umf | 3fdz | https://www.frontiersin.org/articles/10.3389/fcimb.2018.00352/full | CSGID Solves Structures and Identifies Phenotypes for Five Enzymes in Toxoplasma gondii | 2018 | E Filippova, AS Halavaty, G Minasov- Frontiers in cellular, 2018 - eprints.whiterose.ac.uk | Crystallography revealed insights into the overall structure , protein oligomeric states and molecular details of active sites important for ligand recognition The targets studied herein were crystallized and their structures characterized, as structural studies have |
| 5 | 3gvg | - | http://www.sciencedirect.com/science/article/pii/S0300908412002696 | Crystal structures of triosephosphate isomerase from methicillin resistant< i> Staphylococcus aureus</i> MRSA252 provide structural insights into novel modes of ligand binding and unique conformations of catalytic loop | 2012 | S Mukherjee, A Roychowdhury, D Dutta, AK Das - Biochimie, 2012 - Elsevier | ... Structural homologues to SaTIM in PDB were searched by the BLASTP server [46 ... sequence alignment of amino acid residues of SaTIM (3M9Y) with TIM from Bacillus stearothermophilus (2BTM), Thermotoga maritima (1B9B), Mycobacterium tuberculosis (3GVG), Vibrio marinus ... |
| 6 | 3i3r | - | https://scripts.iucr.org/cgi-bin/paper?ud5007 | Crystal structures of the closed form of Mycobacterium tuberculosis dihydrofolate reductase in complex with dihydrofolate and antifolates | 2019 | JA Ribeiro, SM Chavez-Pacheco- Section D: Structural, 2019 - scripts.iucr.org | mode and protein conformation, we solved the structure of the MtDHFRNADPHDIA ternary complex and compared it with the structure of the of MtDHFRNADPHPMX (yellow) and the B. bovis DHFR domain in complex with NADPH and PMX ( PDB entry 3i3r ; Begley et |
| 7 | 3nf4 | - | http://www.jbc.org/content/early/2017/08/02/jbc.M117.788513.short | Crystal structures of TdsC, a dibenzothiophene monooxygenase from the thermophile Paenibacillus sp. A11-2, reveal potential for expanding its substrate selectivity | 2017 | T Hino, H Hamamoto, H Suzuki, H Yagi - Journal of Biological , 2017 - ASBMB | ... replacement search models using MolRep (44). The polyalanine model from Mycobacterium thermoresistibile ( PDB ID: 3NF4 ) showed the highest score. After application of the ... All other structures were solved by molecular replacement of the apo-TdsC structure using ... |
| 8 | 3nf4 | - | https://www.sciencedirect.com/science/article/pii/S0021925820340461 | Crystal structures of TdsC, a dibenzothiophene monooxygenase from the thermophile Paenibacillus sp. A11-2, reveal potential for expanding its substrate | 2017 | T Hino, H Hamamoto, H Suzuki, H Yagi- Journal of Biological, 2017 - Elsevier | 2B). This domain architecture and quaternary structure are also seen for the acyl-CoA dehydrogenase superfamily (25), and the structure of TdsC is very similar to that of DszC (2122, 23 Structure of FMN-bound TdsC FMN binding to TdsC resulted in no global structural changes |
| 9 | 3d64 | 3n58 | http://www.sciencedirect.com/science/article/pii/S1047847715000568 | Crystal structures of S-adenosylhomocysteine hydrolase from the thermophilic bacterium Thermotoga maritima | 2015 | Y Zheng, CC Chen, TP Ko, X Xiao, Y Yang… - Journal of structural …, 2015 - Elsevier | ... The Refseq or PDB numbers of these sequences are: T. maritima, AAC01562.1 ... 1B3R;Trypanosoma brucei, 3H9U; M. tuberculosis, 3DHY; B. melitensis, 3N58; B. pseudomallei, 3D64.The secondary structure elements (helices (α) and strands (β)) of tmSAHH are shown above ... |
| 10 | 3m4s | - | https://www.nature.com/articles/srep30494 | Crystal structures of RidA, an important enzyme for the prevention of toxic side products | 2016 | X Liu, J Zeng, X Chen, W Xie- Scientific reports, 2016 - nature.com | 2DYY, dirty violet), and Entamoeba histolytica l-PSP ( PDB code 3M4S , gray) respectively unpublished), and a putative endoribonuclease l-PSP from Entamoeba histolytica ( PDB code3M4S, unpublished AtRidA is highly similar to other RidA family members in structure , and their |