We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 9DQW | 2024 | 0 |
| 9DR5 | 2024 | 0 |
| 9DR6 | 2024 | 0 |
| 9DR8 | 2024 | 0 |
| 9DRD | 2024 | 0 |
| 9DRE | 2024 | 0 |
| 9DRF | 2024 | 0 |
| 9DSZ | 2024 | 0 |
| 9DT6 | 2024 | 0 |
| 9DT7 | 2024 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 7m53 | - | https://www.cell.com/immunity/pdf/S1074-7613(23)00079-1.pdf | Broadly neutralizing anti-S2 antibodies protect against all three human betacoronaviruses that cause deadly disease | 2023 | P Zhou, G Song, H Liu, M Yuan, W He, N Beutler, X Zhu- Immunity, 2023 - cell.com | Glycan molecules (sticks, white) were modeled (based on structure in PDB : structures . Key epitope residues are buried in the stem-helix bundle (green) in prefusion spike... Figure S7. Structural comparison of antibodies targeting the coronavirus spike S2 stem helix. ... CV3-25 (7NAB), B6 (7M53), and IgG22 (7S3N). S |
| 2 | 7jv4 | 7so9, 7soe, 7ra8, 7sob | https://search.proquest.com/openview/5483cc549d493a55c598e1f12feeae1b/1?pq-origs... | Bridging Experimental and Computational Approaches for Protein Structure Analysis and Dynamic Modeling | 2025 | D Stepanenko - 2025 - search.proquest.com | FPPR cluster analysis applied to spike PDB structures . The 1 value for the corresponding PDB structure . . . . . . 88 5.8 1 value for the corresponding PDB structure . 92 xv 5.10 Scatter |
| 3 | 4g6c | 3laa | https://aip.scitation.org/doi/abs/10.1063/1.5048469 | Blind prediction of protein B-factor and flexibility | 2018 | D Bramer, GW Wei- The Journal of chemical physics, 2018 - aip.scitation.org | MENU. SIGN IN. Sign in/Register. Enter words / phrases / DOI / ISBN / authors / keywords / etc. SEARCH; CITATION SEARCH; ADVANCED SEARCH. Search in: This Publication. search. Advanced |
| 4 | 3hzg | - | https://www.nature.com/articles/s42003-023-05227-w | Biosynthesis of ansamitocin P-3 incurs stress on the producing strain Actinosynnema pretiosum at multiple targets | 2023 | Q Huang, X Zhang, Z Guo, X Fu, Y Zhao- Communications, 2023 - nature.com | FDTS and dTGD were aligned to 3hzg and 1r66, which form a homo-tetramer and homo- The molecular structure of AP-3 was obtained from the PDB database ( PDB ID: 7e4p). |
| 5 | 3s4k | - | https://oaktrust.library.tamu.edu/handle/1969.1/156485 | Biosynthesis and Cellular Actions of Bioactive Natural Products | 2015 | S Mori - 2015 - oaktrust.library.tamu.edu | The structure of AziG was determined using the molecular replacement method, with Mycobacterium tuberculosis thioesterase (PDB ID: 3S4K) as the model. |
| 6 | 4j07 | - | https://www.sciencedirect.com/science/article/pii/S002235491830306X | Biomedical Applications of Lumazine Synthase | 2018 | Y Wei, P Kumar, N Wahome, NJ Mantis- Journal of, 2018 - Elsevier | Oligomeric State of LS, Quaternary Structure , Organism, PDB ID 16, 17, 18 Mycobacterium leprae 19 S. cerevisiae 20 Schizosaccharomyces pombe 21, 1DI0 2F59; 2I0F 2OBX 2O6H 2JFB 1C41 2VI5; 2C9B; 2C92; 2C94; 2C97; 2C9D; 1W19; 1W29 4J07 1EJB 1KYV |
| 7 | 4hjh | 3uw2 | http://www.sciencedirect.com/science/article/pii/S1876162317300366 | Biology, Mechanism, and Structure of Enzymes in the -d-Phosphohexomutase Superfamily | 2017 | KM Stiers, AG Muenks, LJ Beamer - in Protein Chemistry and Structural , 2017 - Elsevier | ... Enzymes in the α-d-phosphohexomutases superfamily catalyze the reversible conversion of phosphosugars, such as glucose 1-phosphate and glucose 6-phosphate. These reactions are fundamental to primary metabolism across the kingdoms of life and are required for a myriad of cellular processes, ... |
| 8 | 3glq | - | http://xb.cnjournals.com/hnndzr/ch/reader/create_pdf.aspx?file_no=2016010308&fla... | Biological activity on cordycepin and cordycepin triphosphate based on the reverse molecular docking | 2016 | Gong, Guocai , Ling et al. - (J. Hunan Agr. Un. (Nat Sci) ), 2016 - xb.cnjournals.com | 12.83 3IID 8.89 2XZL 12.35 1ZOS 8.85 3LBN 12.34 3GLQ 8.75 1F2U 1QQO PDB 1 ADP Fig.1 Comparison the structure conformation |
| 9 | 5urb | 6bqz, 5e3i | https://trendsinpharmacy.org/index.php/pub/article/view/44 | Bioinformatic and Experimental Evaluation of Compounds Targeting Acinetobacter baumannii | 2025 | E Mert, EY Duranay- Trends in Pharmacy, 2025 - trendsinpharmacy.org | Analysis of the crystal structure of the target protein with methionine ( PDB : 5URB ) revealed produced results highly consistent with the crystal structure ( 5URB ), confirming Tyr12, Leu10, |
| 10 | 3meb | 4otl, 4f4f | http://digitalcommons.unl.edu/chemistrydiss/86/ | Bioinformatic and Biophysical Analyses of Proteins | 2017 | J Catazaro - 2017 - digitalcommons.unl.edu | structure of every protein encoded within a particular genome, the aim is to concentrate to steadily produce structural representatives of previously uncharacterized genes. Although the new structures have been deposited in the Protein Data Bank ( PDB ) 4 |