SSGCID
Seattle Structural Genomics Center for Infectious Disease

Cited Structures: list of articles citing SSGCID structures

We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.

This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.

Cited structures

Manually reviewed citations

# PDB Additional SSGCID structures cited Link Title Year Citation Highlighted abstract
1 5udf - https://www.pnas.org/content/115/31/E7389.short Insights into bacterial lipoprotein trafficking from a structure of LolA bound to the LolC periplasmic domain 2018 E Kaplan, NP Greene, A Crow- Proceedings of the, 2018 - National Acad Sciences Fig. 4. Structural and bioinformatic evidence that the Hook is conserved among LolC, LolE, and LolF but absent from the wider type VII ABC transporter superfamily. Comparison of the periplasmic domains of A. actinomycetemcomitans MacB (5LIL), Mycobacterium tuberculosis FtsX (4N8N), E. coli LolC (5NAA), and A. baumannii LolF (5UDF, annotated as LolE in the PDB).
2 4nps - https://www.pnas.org/content/118/12/e2023245118.short Structural basis for selective AMPylation of Rac-subfamily GTPases by Bartonella effector protein 1 (Bep1) 2021 N Dietz, M Huber, I Sorg, A Goepfert- Proceedings of the, 2021 - National Acad Sciences Skip to main content. Main menu. Home; Articles: Current; Special Feature Articles - Most Recent; Special Features; Colloquia; Collected Articles; PNAS Classics; List of Issues. Front Matter: Front Matter Portal; Journal Club. News: For
3 4f40 4h51, 4h7p, 4f2n https://www.preprints.org/manuscript/201902.0122 Leishmania Proteomics: An in Silico Perspective 2019 CA Padilla, MJ Alvarez, A Combariza - 2019 - preprints.org PDB -codes but same structure and proteins with equal structures but elucidated from dif thase from L. major (PGF; PDB ID: 4F40 ) is involved in the lipid metabolic pathway, acting FPPS protein ( PDB ID: 4JZX) is potently inhibited by bisphosphonates in the trypanosomatid
4 4kzk - https://www.preprints.org/manuscript/201909.0313 Structural Flexibility of Peripheral Loops and Extended C-Term Domain of Short Length Substrate Binding Protein from Rhodothermus marinus 2019 JE Bae, IJ Kim, Y Xu, KH Nam - 2019 - preprints.org 120 analysis and substrate docking studies using previously reported crystal structure of SBP ( PDB 121 code 5Z6V) as starting point model structure Among them, 9 models ( PDB code: 123 2QH8, 3LFT, 5ER3, 6DSP, 5BRA, 3KSM, 2DRI, 5DTE, 4KZK , 4RS3, 8ABP) with
5 6nae - https://www.preprints.org/manuscript/202003.0183 Two Achilles' Heels of the Ebolavirus Glycoprotein? 2020 W Li - 2020 - preprints.org in complex with a broadly neutralizing human antibody, adi-15946 31 6NAE Crystal Structure Structure of ZEBOV GP in complex with 3T0265 antibody 36 6S8J Structure of ZEBOV 1. Experimentally determined Ebolavirus GP structures inside Protein Data Bank ( PDB [128]) as
6 6nb8 - https://www.preprints.org/manuscript/202005.0270 Use of Isoelectric Point for Fast Identification of Anti-SARS CoV-2 Coronavirus Proteins 2020 K Mallik - 2020 - preprints.org If we follow the radial structure of the SARS CoV-2 virion, a gradual fall the in the pI values is 6NB8 (+) Human S230 antigen-binding fragment light chain 6.046 to make anti-viral drugs for SARS CoV-2. From the pI consideration, application of human Interferon- ( PDB ID 1AU1
7 4wi1 - https://www.preprints.org/manuscript/202010.0576 Phytochemical, biological and computational investigations of Erythrina fusca Lour. to assess antimalarial property against Plasmodium falciparum 2020 SA Sazed, O Islam, SL Bliese, MRH Hossainey - 2020 - preprints.org All these sub structures impose a chemical structure that has a resemblance only with phaseolin Phaseolin) was subjected to molecular docking study against various proteins of Pf (4plz, 4qt2,4r1e, 4r6w, 4wi1 , 4zxg, 5e16, 5jaz, 5k8s, 5znc, 6aqs, 6ee4, 6fba and 6i4b pdb id
8 4f2n 4f40 https://www.recima21.com.br/index.php/recima21/article/view/148 DOCKING MOLECULAR E AVALIAO DA ATIVIDADE ANTILEISHMANIA IN VITRO DE UM COMPLEXO METLICO DE RUTNIO COM EPIISOPILOTURINA E 2021 J Arajo- -Revista Cientfica Multidisciplinar-ISSN 2675-6218, 2021 - recima21.com.br The 3D protein structures of L. major targets were obtained from the Protein Data Bank ( PDB ) database with codes 1e7w (Pteridine reductase), 5nzg (UDP-glucose Pyrophosphorylase), 5g20 (Glycyl Peptide N-tetradecanoyltransferase), 5c7p Enzimas Identificao PDB 4F2N
9 3tf6 - https://www.research-collection.ethz.ch/bitstream/handle/20.500.11850/337776/1/H... Neural networks for improving drug discovery e fficiency 2019 H Hassan Harrirou - 2019 - research-collection.ethz.ch The PDBBind 2018 general set version contains 19588 biomolecu- lar structures , for which some SMILES or FASTA), or full 3D representations of atom coordinates (ie PDB ), with bonds preferable properties of inputs to most machine-learning algorithms: a fixed-size structure
10 3qh4 - https://www.researchsquare.com/article/rs-187084/latest.pdf Protein Engineering for Enhanced Enantioselectivity of Carboxylesterase Est924 Toward Ethyl 2-Arylpropionates 2021 X Liu, M Zhao, X Fan, Y Fu - 2021 - researchsquare.com Enhancement of the enantioselectivity of carboxylesterase A by structure -based mutagenesis. J Biotechnol Page 13. Page 13/14 PDB entry A1 A2 B1 B2 Est924 I203 A203 G208 I212 3H17 M193 V194 G198 M202 3QH4 A209 F210 A214 M218 3WJ1 F197 L198 H202 F206