We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 3GMT | 2009 | 9 |
| 3GNN | 2009 | 1 |
| 3GNQ | 2009 | 0 |
| 3GP3 | 2009 | 2 |
| 3GP5 | 2009 | 7 |
| 3GQT | 2009 | 3 |
| 3GRP | 2009 | 9 |
| 3GTD | 2009 | 8 |
| 3GVC | 2009 | 1 |
| 3GVF | 2009 | 2 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3cez | - | http://ntnu.diva-portal.org/smash/record.jsf?pid=diva2:603697 | Structure-functional Characterization of Mammalian Redox Proteins: Methionine sulfoxide reductase B1 (MsrB1), Glutaredoxin domain (Grx) of TGR, and Thioredoxin (Trx) | 2013 | O Dobrovolska - 2013 - ntnu.diva-portal.org | ... situated in the second ?-sheet. The four cysteines Cys23, Cys26, Cys71, and Cys74, situated outside the protein active site, coordinate zinc ion, stabilizing the structure of MsrB1. Figure II.1.2. Structure of MsrB1 (pdb code 2kv1) [55]. II.1.1 MsrB1-Thioredoxin interaction ... |
| 2 | 3cez | 3cxk | http://www.sciencedirect.com/science/article/pii/S002228360901095X | Methionine sulfoxide reductase B displays a high level of flexibility | 2009 | FM Ranaivoson, F Neiers, B Kauffmann? - Journal of molecular Biology, 2009 - Elsevier | ... View thumbnail images View high quality image (983K). Two X-ray structures of MsrB from Neisseria gonorrhoeae [Protein Data Bank (PDB) ID 1L1D 12 ] and Burkhodelia pseudomallei (PDB IDs 3CXK and 3CEZ; unpublished results) have been determined so far. ... |
| 3 | 3cez | 3cxk, 3eoo | http://www.jbc.org/content/285/43/33315.short | Insights into function, catalytic mechanism, and fold evolution of selenoprotein methionine sulfoxide reductase B1 through structural analysis | 2010 | FL Aachmann, LS Sal, HY Kim, SM Marino? - Journal of Biological Chemistry, 2010 - ASBMB | ... Relative to MsrB1, the crystal structures of MsrBs from N. gonorhoeae (PDB code 1L1D) (8), X. campestris (PDB code 3HCI) (36), B. pseudomallei (PDB code 3CEZ/3CXK), S. pneumoniae (PDB code 3E0M) (31), and B. subtilis (3E0O) (31), as well as the solution structure of B ... |
| 4 | 3cez | - | http://onlinelibrary.wiley.com/doi/10.1111/j.1365-2958.2009.06680.x/full | Structural and kinetic analysis of an MsrA-MsrB fusion protein from Streptococcus pneumoniae | 2009 | YK Kim, YJ Shin, WH Lee, HY Kim? - Molecular Microbiology, 2009 - Wiley Online Library | ... The Protein Data Bank accession codes for other Msr proteins discussed in this article are as follows: BtMsrA (1FVA), EcMsrA (1FF3), MtMsrA (1NWA), NmMsrA (3BQE, 3BQF, 3BQH), PtMsrA (2J89), BsMsrB (1XM0), BpMsrB (3CEZ, 3CXK) and NgMsrB (1L1D). Kinetic assays. ... |
| 5 | 3cez | - | http://mss3.libraries.rutgers.edu/dlr/showfed.php?pid=rutgers-lib:35960 | Order and disorder in proteins | 2011 | A Ertekin - 2011 - mss3.libraries.rutgers.edu | ... 83 Figure 4.8 The superimposition of 2.6 ? X-ray crystal structure (PDB ID: 3E0O) and sparse-constraint NMR structures for MsrB from B. subtilis. ... NOESY: Nuclear Overhauser Effect Spectroscopy PDB: Protein data bank PSI: Protein Structure Initiative ... |
| 6 | 3cxk | - | http://onlinelibrary.wiley.com/doi/10.1002/pmic.201300357/full | Unraveling the specificities of the different human methionine sulfoxide reductases | 2014 | E Vandermarliere, B Ghesquire, V Jonckheere - , 2014 - Wiley Online Library | ... In a first step, all human protein structures determined by X-ray crystallography were retrieved from the Protein Data Bank (PDB) [30]. ... With the aid of a BLAST search [33] against the PDB, the possible templates were shortlisted and PDB-entry 3CXK [34] was chosen as a ... |
| 7 | 3cxk | - | http://www.sciencedirect.com/science/article/pii/S0378111912014242 | Methionine sulfoxide reduction in ciliates: Characterization of the ready-to-use methionine sulfoxide-< i> R</i>-reductase genes in< i> Euplotes</i> | 2013 | N Dobri, EEN Oumarou, C Alimenti, C Ortenzi? - Gene, 2012 - Elsevier | ... The crystallographic structure of the Burkholderia pseudomallei MsrB (PDB ID: 3cxk) was automatically selected by the server as a template since it shows an amino acid sequence identity of 53% and 56% with the MsrB protein of E. raikovi and E. nobilii, respectively. ... |
| 8 | 3cxk | - | https://www.sciencedirect.com/science/article/pii/S1570963920302223 | Functional characterization of methionine sulfoxide reductases from Leptospira interrogans | 2020 | N Sasoni, MD Hartman, SA Guerrero- et Biophysica Acta (BBA, 2020 - Elsevier | The Met oxidation could change the structure and function of many proteins, not only of those redox-related but also of others involved in different metabolic pathways. Until now, there is no information about the presence or function of Msrs enzymes in Leptospira interrogans |
| 9 | 3d53 | 3oc6 | http://pubs.rsc.org/en/content/articlehtml/2015/sc/c5sc01065a | Enzyme repurposing of a hydrolase as an emergent peroxidase upon metal binding | 2015 | N Fujieda, J Schätti, E Stuttfeld, K Ohkubo, T Maier… - Chemical …, 2015 - pubs.rsc.org | ... These wild-type proteins or their single mutant isoforms (pdb code: 3D53, 2F99, 1JSY, 1FHI(bearing a Q83E mutation), 1MEJ ... yellow sticks); (B) close-up view of the Cu1 binding site inCu·6-PGLac (PDB code 4TM7 ... The X-ray structure was refined to a resolution of 1.39 Å (Fig. ... |
| 10 | 3d53 | 3ome | http://pubs.rsc.org/en/content/articlehtml/2012/mt/c2mt20010d | Identification of two-histidines one-carboxylate binding motifs in proteins amenable to facial coordination to metals | 2012 | M Schmid, G Collet, P Cuniasse, F Gilardoni? - Metallomics, 2012 - pubs.rsc.org | ... 60% sequence similarity are indicated by a * PDB code, Annotated protein function, Carboxylate, Histidine 1, Histidine 2. ... Aminocarboxypropyl-transferase, Glu86*, His193*, His195*. 3D53, Pyrophosphatase, Asp114*, His76*, His77*. ... |