We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 5IDQ | 2016 | 0 |
| 6W6A | 2020 | 0 |
| 6W80 | 2020 | 0 |
| 6WBD | 2020 | 0 |
| 6WCT | 2020 | 0 |
| 5TP4 | 2017 | 0 |
| 6WFM | 2020 | 0 |
| 5THX | 2016 | 0 |
| 6WHJ | 2020 | 0 |
| 6WHP | 2020 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 4gnv | - | http://www.jbc.org/content/early/2018/01/09/jbc.RA117.000948.short | Structural and mechanistic analysis of a -glycoside phosphorylase identified by screening a metagenomic library | 2018 | SS Macdonald, A Patel, VLC Larmour- Journal of Biological, 2018 - ASBMB | in BglP it is a glutamine, as seen in the structural overlay of Figure 8C wherein the 2FGlc- BglP structure is superimposed on the structures of two other GH3 -N-acetylglucosaminidases (NagZ from Burkholderia cenocepacia in complex with GlcNAc [ PDB : 4GNV ] and NagZ from |
| 2 | 4efz | - | http://search.proquest.com/openview/3f7a517c191fc1517c1ea86b15e8f1b6/1?pq-origsi... | Structural and Mechanistic Characterization of Enzymes in Persulfide Oxidation and Monolignol Biosynthesis Pathways | 2018 | SA Sattler - 2018 - search.proquest.com | of apo-form PpPDO2 diffraction data were conducted by molecular replacement with the PDB coordinates of model 4EFZ using PHENIX Phaser (18) by molecular replacement as well, using the atomic coordinates of the unpublished structure for a |
| 3 | 3qi6 | - | http://onlinelibrary.wiley.com/doi/10.1002/pro.3158/full | Structural and mechanistic insights into homocysteine degradation by a mutant of methionine lyase based on substrateassisted catalysis | 2017 | D Sato, T Shiba, S Yunoto, K Furutani - Protein , 2017 - Wiley Online Library | ... Cys116 remains connected to the 2*/3* loop to form the active center. We previouslydemonstrated that the crystal structure of PpMGL is a ... 1e5f, 3acz and 5dx5), cystathionine-synthases (PDB: 1cs1 and 3qi6) and cystathionine -lyases (PDB: 1n8p and 2nmp). ... |
| 4 | 3p4i | - | http://www.biomedcentral.com/1472-6807/12/24/ | Structural and mechanistic investigations on Salmonella typhimurium acetate kinase (AckA): identification of a putative ligand binding pocket at the dimeric interface | 2012 | S Chittori, H Savithri, M Murthy - BMC structural biology, 2012 - biomedcentral.com | ... Crystal structures of two archeal acetate kinases, from Thermotoga maritima (PDB:2IIR, unpublished results) and Methanosarcina thermophila[15] and one from Mycobacterium avium (PDB:3P4I, unpublished results) have been determined earlier. ... |
| 5 | 4mei | 4nhf, 4o3v, 4kz1, 4lso, 4jf8 | https://link.springer.com/chapter/10.1007/978-3-319-75241-9_2 | Structural and Molecular Biology of Type IV Secretion Systems | 2017 | L Terradot, C Berg, G Waksman- Type IV Secretion in Gram-Negative, 2017 - Springer | 1.2 Composition of T4SSs. X-ray crystallography, nuclear magnetic resonance (NMR), and more recently electron microscopy have been successfully used to provide insights into the structure of T4SSs Plasmid or bacteria. PDB or EMDB ID 4KZ1,4JF8,4LSO, 4MEI ,4NHF m |
| 6 | 5vir | 4fry, 4ymi | https://pubs.acs.org/doi/abs/10.1021/acsinfecdis.0c00735 | Structural and Molecular Dynamics of Mycobacterium tuberculosis Malic Enzyme, a Potential Anti-TB Drug Target | 2020 | KH Burley, BJ Cuthbert, P Basu- ACS Infectious, 2020 - ACS Publications | \ Interestingly, the three top-scoring NADP+ molecules are found in structures of Mtb nicotinamide-mononucleotide adenylyltransferase (NadD) (PDB ID: 4S1O) and Mycobacterium abscessus NadD (PDB ID: 4YMI and 5VIR). These results |
| 7 | 6q06 | - | https://www.sciencedirect.com/science/article/pii/S0924857920301102 | Structural and molecular modelling studies reveal a new mechanism of action of chloroquine and hydroxychloroquine against SARS-CoV-2 infection | 2020 | J Fantini, C Di Scala, H Chahinian, N Yahi- International journal of, 2020 - Elsevier | N-acetylneuraminic acid (Neu5Ac) was generated with the Hyperchem database. 9-O-acetyl-N-acetylneuraminic acid (9-O-SIA) was retrieved from pdb file 6Q06 [18] Its three-dimensioanl structure was retrieved from pdb file # 4V2O [19] |
| 8 | 3h81 | - | https://link.springer.com/content/pdf/10.1007/s12275-020-0089-1.pdf | Structural and sequence comparisons of bacterial enoyl-CoA isomerase and enoyl-CoA hydratase | 2020 | J Hwang, CS Jeong, CW Lee, SC Shin, HW Kim- Journal of, 2020 - Springer | (D) The electrostatic surface potential of the trimeric HyECH structure also shows that the periphery of the putative ligand-binding site has a positive charge MtECH, ECH from M. tuberculosis ( PDB code 3H81 ). Page 7. Crystal structures of BoECI and HyECH 7 |
| 9 | 2mcq | 2kz0 | http://proteinsf.jbc.org/highwire/filestream/4748/field_highwire_article_pdf/0/j... | Structural and spectroscopic insights into | 2014 | N Rouhier, C Didierjean, BZ Couturier, MK Johnson - 2014 - ASBMB | ... it seems also that the side-chain of an arginine residue (R127 in AtBolA1) present in α3-helixis involved in tertiary structure maintenance (Fig. ... Accordingly, in Ehrlichia chaffeensis andRickettsia prowazekii BolA structures (pdb entry 2KZ0 and 2MCQ respectively), two ... |
| 10 | 2kz0 | 2mcq | http://www.jbc.org/content/289/35/24588.short | Structural and spectroscopic insights into BolA-glutaredoxin complexes | 2014 | T Roret, P Tsan, J Couturier, B Zhang - Journal of Biological Chemistry, 2014 - ASBMB | ... and the AtGrxS14-BolA2 apo-heterodimer model (2MMA) are available at the Research Collaboratory for Structural Bioinformatics (RCSB) Protein Data Bank. ... Accordingly, in Ehrlichia chaffeensis and Rickettsia prowazekii BolA structures (PDB entry 2KZ0 and 2MCQ ... |