We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 3QH4 | 2011 | 12 |
| 4ODJ | 2014 | 12 |
| 3KHW | 2010 | 12 |
| 7RA8 | 2021 | 12 |
| 3MD7 | 2010 | 12 |
| 3I4E | 2009 | 12 |
| 3MEN | 2010 | 12 |
| 3L56 | 2010 | 12 |
| 4WI1 | 2016 | 12 |
| 4DLP | 2012 | 11 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3hwk | - | http://www.sciencedirect.com/science/article/pii/S104784771000328X | Crystal structure of< i> Salmonella typhimurium</i> 2-methylcitrate synthase: Insights on domain movement and substrate specificity | 2011 | S Chittori, HS Savithri, MRN Murthy - Journal of Structural Biology, 2011 - Elsevier | ... In contrast, structural comparison of StPrpC with Mycobacterium tuberculosis GltA1 (MtGltA1; PDB: 3HWK; unpublished results) and Pyrococcus furiosus CS (PfGltA; type-I CS with shorter N-terminal) showed significant similarity in the core structure as well as in the flanking C-terminal extension... |
| 2 | 3moy | - | http://onlinelibrary.wiley.com/doi/10.1002/jcc.21900/full | Fast and accurate computation schemes for evaluating vibrational entropy of proteins | 2011 | B Xu, H Shen, X Zhu, G Li - Journal of computational chemistry, 2011 - Wiley Online Library | ... PDB id, Protein length, Standard NMA (kcal mol ?1 K ?1 ), Scaled BNM (kcal mol ?1 K ?1 ), Scaled GNM (kcal mol ?1 K ?1 ), Scaled ANM (kcal mol ?1 K ?1 ). 1al3, 324, 8.462, 8.405, 8.466, 8.818. ... 3m73, 314, 10.930, 10.912, 11.027, 10.248. 3moy, 263, 9.020, 9.108, 9.183, 9.171. ... |
| 3 | 3emk | - | http://www.sciencedirect.com/science/article/pii/S0022283611000258 | The Crystal Structure of l-Sorbose Reductase from< i> Gluconobacter frateurii</i> Complexed with NADPH and l-Sorbose | 2011 | K Kubota, K Nagata, M Okai, K Miyazono? - Journal of molecular Biology, 2011 - Elsevier | ... Appendix A. ... Strictly conserved residues among the proteins are shown with a red background. Protein names are shown as PDB accession numbers: 2HQ1, glucose/ribitol dehydrogenase from Clostridium thermocellum; 3EMK, glucose/ribitol dehydrogenase from Brucella melitensis; ... |
| 4 | 3l56 | - | http://www.springerlink.com/index/L53174W7H2780715.pdf | Molecular mechanisms of transcription and replication of the influenza A virus genome | 2011 | S Zhang, T Toyoda - Frontiers in Biology, 2011 - Springer | ... (b) The electrostatic potential of PB2 3/3 E627 was calculated using the GRASP program. Modified from Fig. 2 of Kuzuhara et al. (2009b). G: PB2 C-terminal NLS. PDB accession number:3L56. Figures were rendered in PyMOL (http://www.pymol.org/). ... |
| 5 | 3oec | - | http://www.jbc.org/content/286/42/37011.short | Biochemical Studies and Ligand-bound Structures of Biphenyl Dehydrogenase from Pandoraea pnomenusa Strain B-356 Reveal a Basis for Broad Specificity of the Enzyme | 2011 | S Dhindwal, DN Patil, M Mohammadi? - Journal of Biological Chemistry, 2011 - ASBMB | ... PDB code 1BDB and BphB B-356 are shown in black color, and other structures are shown in light colors. These PDB codes are: 2HQ1, 3OEC, 3PKO, 2UVD, 2PNF, 2WSB, 1YDE, 2WDZ, 1HDC, and 1NFR. Reactivity of BphB B-356 with Polychlorinated Biphenyls. ... |
| 6 | 3fs2 | 3ez4, 3ijp | http://www.tandfonline.com/doi/full/10.3109/10611861003649753 | Targeting multiple targets in Pseudomonas aeruginosa PAO1 using flux balance analysis of a reconstructed genome-scale metabolic network | 2011 | D Perumal, A Samal, KR Sakharkar… - Journal of drug …, 2011 - Taylor & Francis | ... 3D structural information of target protein–ligand molecular complexes is a very usefulmethod to identify high-quality drug targets. ... A search against Protein Data Bank (PDB)helped us shortlist targets that had structure available. ... |
| 7 | 3k2h | 3nrr, 3kgb | http://informahealthcare.com/doi/abs/10.1517/13543776.2011.587804 | Antifolate agents: a patent review (2006-2010) | 2011 | DL Wright, AC Anderson - Expert opinion on therapeutic patents, 2011 - informahealthcare.com | ... Also reported for the first time in 2010 by the Seattle Structural Genomics Center for Infectious Disease is the structure of DHFR-TS from Babesia bovis bound to NADP, dUMP and pemetrexed (PDB ID: 3K2H) or raltitrexed (PDB ID: 3NRR). ... |
| 8 | 3q8n | - | http://search.ebscohost.com/login.aspx?direct=true&profile=ehost&scope=site&auth... | MODELING AND DOCKING STUDIES OF 4-AMINOBUTYRATE AMINOTRANSFERASE FOR HUNTINGTON'S DISEASE. | 2011 | H Pareek, P Thakur, D Ray - International Journal of Pharma & Bio Sciences, 2011 - search.ebscohost.com | ... desired protein ie GABA-AT using a template sequence with PDB code 3Q8N. The constructed 3D models were checked for DOPE score and Ramachandran plot respectively with Modeller 9v8 and PROCHECK. Results are shown in Table 1. Model No. ... |
| 9 | 3la9 | - | http://www.springerlink.com/index/M46X0Q11002X8755.pdf | Structure and biology of trimeric autotransporter adhesins | 2011 | A ?yskowski, JC Leo, A Goldman - Bacterial Adhesion, 2011 - Springer | ... The structures are identified by their PDB ID codes where avail- able. ... structure of Haemophilus HiaDB2; (c) 3emi: structure of Haemophilus Hia 307?442 non-adhesive domain; (d) 3emo: structure of transmembrane domain of Haemophilus Hia 973?1098; (e) 3la9: structure of ... |
| 10 | 3dmo | - | http://permalink.lanl.gov/object/tr?what=info:lanl-repo/lareport/LA-UR-11-04078 | Achievements of structural genomics | 2011 | TC Terwilliger - 2011 - permalink.lanl.gov | ... Semi-automated Structure determination ~ ... PDB 3BV6, 2275 AA Metallo protein - ... l University ofIowa 2 University of Michigan Medical School Crystal structures of the FDTS-FAD- 3The JointCenter for Structural Genomics at GNF 4SSRL, Stanford University dUMP complex. ... |