SSGCID
Seattle Structural Genomics Center for Infectious Disease

SSGCID models

Structures predicted by homology modelling with Robetta or modelled de-novo with evolutionary constraints using GREMLIN and Rosetta.

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Results: 547

Model Method Target Status Annotation Organism Community
IPD_88367 comparative modelling MygeA.20140.a target approved Endoribonuclease YbeY (MG_388) Mycoplasma genitalium internal
IPD_14042 comparative modelling MygeA.00057.b target approved Energy-coupling factor transporter ATP-binding protein EcfA1 (MG_179) Mycoplasma genitalium internal
IPD_3056 comparative modelling MygeA.10014.b target approved Energy-coupling factor transporter ATP-binding protein EcfA2 (MG_180) Mycoplasma genitalium internal
IPD_85028 comparative modelling NegoA.00084.a crystallized enolase Neisseria gonorrhoeae request
IPD_82009 comparative modelling ChtrB.00084.a in PDB Enolase (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase) Chlamydia trachomatis request
IPD_81182 comparative modelling MygeA.01024.a target approved Enolase (MG_407) Mycoplasma genitalium interest
IPD_88373 comparative modelling MygeA.20160.a target approved FMN-dependent NADH-azoreductase Mycoplasma genitalium internal
IPD_10569 comparative modelling MygeA.18184.a target approved Formamidopyrimidine-DNA glycosylase (MG_498) Mycoplasma genitalium internal
IPD_81176 comparative modelling MygeA.00345.a cloned Fructose-bisphosphate aldolase (MG_023) Mycoplasma genitalium interest
IPD_10690 comparative modelling AccaA.19900.a in PDB Glucokinase Acanthamoeba castellanii request
IPD_10691 comparative modelling BamaA.19900.a in PDB Glucokinase Balamuthia mandrillaris request
IPD_82022 comparative modelling ChtrB.17127.a in PDB Glucose-6-phosphate isomerase (GPI) (EC 5.3.1.9) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Chlamydia trachomatis request
IPD_81216 comparative modelling MygeA.20150.a target approved Glucose-6-phosphate isomerase (MG_111) Mycoplasma genitalium interest
IPD_85045 comparative modelling NegoA.17127.a purified glucose-6-phosphate isomerase 1 Neisseria gonorrhoeae request
IPD_79426 comparative modelling LemaA.19527.a expressed Glucosyl transferase (HmdUGT) Leishmania major request
IPD_79412 comparative modelling LeinA.19527.a purified Glucosyl transferase (HmdUGT) Leishmania infantum request
IPD_85112 comparative modelling MygeA.01187.a target approved Glutamate--tRNA ligase (MG_462) Mycoplasma genitalium internal
IPD_85122 comparative modelling MygeA.20033.a target approved Glutamyl-tRNA(Gln) amidotransferase subunit A (MG_099) Mycoplasma genitalium internal
IPD_82012 comparative modelling ChtrB.00839.a in PDB Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12) (NAD-dependent glyceraldehyde-3-phosphate dehydrogenase) Chlamydia trachomatis request
IPD_81180 comparative modelling MygeA.00914.a in PDB Glyceraldehyde-3-phosphate dehydrogenase (MG_301) Mycoplasma genitalium interest
IPD_88263 comparative modelling MygeA.00232.a target approved Glycerol kinase (MG_038) Mycoplasma genitalium internal
IPD_3023 comparative modelling MygeA.20016.a target approved Glycerol-3-phosphate acyltransferase (MG_247) Mycoplasma genitalium internal
IPD_ma-pbefu de-novo with evolutionary constraints ChtrB.17928.a purified Glycine--tRNA ligase (Glycyl-tRNA synthetase) (GlyRS) (EC 6.1.1.14) [Includes: Glycine--tRNA ligase alpha subunit (Glycyl-tRNA synthetase alpha subunit); Glycine--tRNA ligase beta subunit (Glycyl-tRNA synthetase beta subunit)] Chlamydia trachomatis request
IPD_ma-rwmi2 de-novo with evolutionary constraints ChtrB.17928.a purified Glycine--tRNA ligase (Glycyl-tRNA synthetase) (GlyRS) (EC 6.1.1.14) [Includes: Glycine--tRNA ligase alpha subunit (Glycyl-tRNA synthetase alpha subunit); Glycine--tRNA ligase beta subunit (Glycyl-tRNA synthetase beta subunit)] Chlamydia trachomatis request
IPD_ma-swobt de-novo with evolutionary constraints ChtrB.17928.a purified Glycine--tRNA ligase (Glycyl-tRNA synthetase) (GlyRS) (EC 6.1.1.14) [Includes: Glycine--tRNA ligase alpha subunit (Glycyl-tRNA synthetase alpha subunit); Glycine--tRNA ligase beta subunit (Glycyl-tRNA synthetase beta subunit)] Chlamydia trachomatis request