SSGCID
Seattle Structural Genomics Center for Infectious Disease

SSGCID models

Structures predicted by homology modelling with Robetta or modelled de-novo with evolutionary constraints using GREMLIN and Rosetta.

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Results: 547

Model Method Target Status Annotation Organism Community
IPD_ma-9en24 de-novo with evolutionary constraints CrfaA.19528.a soluble J-binding protein 2 (JBP2) Crithidia fasciculata request
IPD_ma-ep00y de-novo with evolutionary constraints ChtrB.17928.a purified Glycine--tRNA ligase (Glycyl-tRNA synthetase) (GlyRS) (EC 6.1.1.14) [Includes: Glycine--tRNA ligase alpha subunit (Glycyl-tRNA synthetase alpha subunit); Glycine--tRNA ligase beta subunit (Glycyl-tRNA synthetase beta subunit)] Chlamydia trachomatis request
IPD_ma-f5ddd de-novo with evolutionary constraints ChtrB.00120.a purified GTPase Obg (EC 3.6.5.-) (GTP-binding protein Obg) Chlamydia trachomatis request
IPD_ma-ifaip de-novo with evolutionary constraints ChtrB.17946.a purified DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)]) Chlamydia trachomatis request
IPD_ma-pbefu de-novo with evolutionary constraints ChtrB.17928.a purified Glycine--tRNA ligase (Glycyl-tRNA synthetase) (GlyRS) (EC 6.1.1.14) [Includes: Glycine--tRNA ligase alpha subunit (Glycyl-tRNA synthetase alpha subunit); Glycine--tRNA ligase beta subunit (Glycyl-tRNA synthetase beta subunit)] Chlamydia trachomatis request
IPD_ma-qvh2h de-novo with evolutionary constraints CrfaA.19528.a soluble J-binding protein 2 (JBP2) Crithidia fasciculata request
IPD_ma-rwmi2 de-novo with evolutionary constraints ChtrB.17928.a purified Glycine--tRNA ligase (Glycyl-tRNA synthetase) (GlyRS) (EC 6.1.1.14) [Includes: Glycine--tRNA ligase alpha subunit (Glycyl-tRNA synthetase alpha subunit); Glycine--tRNA ligase beta subunit (Glycyl-tRNA synthetase beta subunit)] Chlamydia trachomatis request
IPD_ma-swobt de-novo with evolutionary constraints ChtrB.17928.a purified Glycine--tRNA ligase (Glycyl-tRNA synthetase) (GlyRS) (EC 6.1.1.14) [Includes: Glycine--tRNA ligase alpha subunit (Glycyl-tRNA synthetase alpha subunit); Glycine--tRNA ligase beta subunit (Glycyl-tRNA synthetase beta subunit)] Chlamydia trachomatis request
IPD_ma-u7vmd de-novo with evolutionary constraints NegoA.00222.a soluble signal recognition particle protein Neisseria gonorrhoeae request
IPD_ma-uipso de-novo with evolutionary constraints LeinA.19528.a soluble J-binding protein 2 (JBP2) Leishmania infantum request
IPD_ma-umxun de-novo with evolutionary constraints ChtrB.17928.a purified Glycine--tRNA ligase (Glycyl-tRNA synthetase) (GlyRS) (EC 6.1.1.14) [Includes: Glycine--tRNA ligase alpha subunit (Glycyl-tRNA synthetase alpha subunit); Glycine--tRNA ligase beta subunit (Glycyl-tRNA synthetase beta subunit)] Chlamydia trachomatis request
IPD_ma-xp9dq de-novo with evolutionary constraints LeinA.19528.a soluble J-binding protein 2 (JBP2) Leishmania infantum request
IPD_81926 comparative modelling MyavA.19465.a native diffraction-data Dephospho-CoA kinase CoaE (EC 2.7.1.24) Mycobacterium avium request
IPD_82003 comparative modelling ChtrB.00612.a diffraction Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS) Chlamydia trachomatis request
IPD_82005 comparative modelling ChtrB.00169.a soluble Replicative DNA helicase (EC 3.6.4.12) Chlamydia trachomatis request
IPD_82006 comparative modelling ChtrB.18708.a cloned Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS) Chlamydia trachomatis request
IPD_82007 comparative modelling ChtrB.01032.a purified Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS) Chlamydia trachomatis request
IPD_82008 comparative modelling ChtrB.00163.a expressed Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS) Chlamydia trachomatis request
IPD_82009 comparative modelling ChtrB.00084.a in PDB Enolase (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase) Chlamydia trachomatis request
IPD_82010 comparative modelling ChtrB.18890.a soluble Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS) Chlamydia trachomatis request
IPD_82011 comparative modelling ChtrB.00944.a purified Ribose-5-phosphate isomerase A (EC 5.3.1.6) (Phosphoriboisomerase A) (PRI) Chlamydia trachomatis request
IPD_82012 comparative modelling ChtrB.00839.a in PDB Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12) (NAD-dependent glyceraldehyde-3-phosphate dehydrogenase) Chlamydia trachomatis request
IPD_82013 comparative modelling ChtrB.00029.a soluble Thioredoxin (Trx) Chlamydia trachomatis request
IPD_82014 comparative modelling ChtrB.18178.a purified Lon protease (EC 3.4.21.53) (ATP-dependent protease La) Chlamydia trachomatis request
IPD_82015 comparative modelling ChtrB.17928.a purified Glycine--tRNA ligase (Glycyl-tRNA synthetase) (GlyRS) (EC 6.1.1.14) [Includes: Glycine--tRNA ligase alpha subunit (Glycyl-tRNA synthetase alpha subunit); Glycine--tRNA ligase beta subunit (Glycyl-tRNA synthetase beta subunit)] Chlamydia trachomatis request