We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 5VN6 | 2017 | 0 |
| 8SLF | 2023 | 0 |
| 8SLD | 2023 | 0 |
| 9Z8K | 2025 | 0 |
| 8SKF | 2023 | 0 |
| 9Z9C | 2025 | 0 |
| 5VIX | 2017 | 0 |
| 5VC2 | 2017 | 0 |
| 5VA8 | 2017 | 0 |
| 5V77 | 2017 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 2lwk | - | http://www.mdpi.com/1422-0067/17/6/779/htm | Recent Advances in Developing Small Molecules Targeting Nucleic Acid | 2016 | M Wang, Y Yu, C Liang, A Lu, G Zhang - International journal of molecular , 2016 - mdpi.com | ... Figure 12A) consists of a planar ring, an amino sugar structure and a fused cyclohexane ringsystem. A lot of structural studies have been investigated to understand the interaction betweenDNA duplex and molecule [28,46,47,48,49,50,51]. Most of the structures indicate that ... |
| 2 | 3v7o | - | https://www.nature.com/articles/srep23743?WT.feed_name=subjects_genetics | Conserved differences in protein sequence determine the human pathogenicity of Ebolaviruses | 2016 | M Pappalardo, M Juli, MJ Howard, JS Rossman- Scientific reports, 2016 - nature.com | ... of both Ebola virus ( PDB structure 2I8B) and Reston virus ( PDB structure 3V7O ) VP30 are ... Structural data are available for both the Ebola virus and Reston virus VP35 ... These structures are highly conserved, however functional studies have demonstrated that Reston virus VP35 ... |
| 3 | 3oxk | 3o0m, 3lb5, 3p0t, 3r6f | http://search.proquest.com/openview/a6bee6255f2ecb6acc21ab8e2dbd25bd/1?pq-origsi... | Structural Biology for Drug Design: Applications in Two Systems | 2016 | KM Maize - 2016 - search.proquest.com | ... Structurally, the purple HIT-like clade (4EGU, 3OXK) appears to be highly related to the known Hint proteins, whereas the remaining three HIT-like clades differ from the Hints by the addition of a long 12-15 residue C- terminal helix ... Sequence alignment alone fails to properly separate these two structural subclasses: those that draw the C-terminal helix from the same monomer (2EO4, 3LB5, 3P0T, 3O0M, 3NRD, 3OHE, 3I4S, and 3I24), and those that cross over to ... |
| 4 | 4iuj | - | http://onlinelibrary.wiley.com/doi/10.1002/med.21401/full | The influenza virus polymerase complex: an update on its structure, functions, and significance for antiviral drug design | 2016 | A Stevaert, L Naesens - Medicinal Research Reviews, 2016 - Wiley Online Library | ... Closeup showing a superposition of the crystal structures of the PAC-PB1N interface[223] (PDB: 3CM8) on that of the FluA polymerase (light gray) and the apo form of PAC[224] (light blue; PDB: 4IUJ). ... |
| 5 | 3r9r | - | http://www.postepybiochemii.pl/pdf/3_2016/262-272.pdf | Structure-guided, target-based drug discoveryexploiting genome information from HIV to mycobacterial infections | 2016 | S Malhotra, SE Thomas, MB Ochoa - Postepy , 2016 - postepybiochemii.pl | ... purC structure from Saccharomyces cerevisiae (PDB ID: 1OBD) and in pink is the recentapo-form crystal structure (PDB ID: 3R9R) of purC ... The modelling pipeline begins with identificationof structural homolog(s) using a sequence-structure homology recogni- tion approach ... |
| 6 | 3sbx | - | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4979012/ | Structural basis for cytokinin production by LOG from Corynebacterium glutamicum | 2016 | H Seo, S Kim, HY Sagong, HF Son, KS Jin - Scientific , 2016 - ncbi.nlm.nih.gov | ... also showed that LOGs from C. purpurea (CpLOG, PDB CODE 5AJT, Z-score 26.8) and M.marinum (MmLOG, PDB CODE 3SBX, Z-score ... To compare CgLOG with other LOGs, wesuperposed the CgLOG structure with other LOG proteins such as AtLOG3, CpLOG, and ... |
| 7 | 3tcq | - | http://www.mdpi.com/1422-0067/17/11/1748/htm | Integrated Computational Approach for Virtual Hit Identification against Ebola Viral Proteins VP35 and VP40 | 2016 | MU Mirza, N Ikram - International Journal of Molecular Sciences, 2016 - mdpi.com | ... We have identified VP40 assemblies in a filamentous structure and have shown that disruption of these structures halts viral egress... The homology-based search inferred that the 3D coordinate crystal structure of the Reston Ebola virus RNA binding domain (PDB ID: 3KS4), in addition to the crystal structure of the Sudan Ebola virus matrix protein VP40 (PDB ID: 3TCQ), were the best hits based on query coverage ... |
| 8 | 3gvi | - | http://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.1002396 | An Ancient Fingerprint Indicates the Common Ancestry of Rossmann-Fold Enzymes Utilizing Different Ribose-Based Cofactors | 2016 | P Laurino, Tth-Petrczy, R Meana-Paeda, W Lin - PLoS Biol, 2016 - journals.plos.org | ... PDB (Protein Data Bank) IDs and corresponding cofactors: 1JG2, ADN; 3GVI, ADP; 2HMU, ATP;2XXB, AMP; 1BWC, FAD; 1V5E, FAD; 1EG2, MTA; 2A14, 2PBF ... A) Zoom-in view of the structureof L-3-hydroxyacyl-CoA dehydrogenase belonging to the Rossmann fold (PDB 1F17 ... |
| 9 | 3mmt | - | https://www.sciencedirect.com/science/article/pii/S2352340916304905 | Interaction network and mass spectrometry data of Xanthomonas citri subsp. citri surface proteins from differential proteomic analysis of infectious and non | 2016 | CM Carnielli, J Artier, JCF de Oliveira- Data in brief, 2016 - Elsevier | ID, Gene symbol, ENSEMBL, SWISS-PROT, Protein structure ( PDB ), Conserved domain (CDD), Gene ontology (GO) GO:0003735 structural constituent of ribosome citri (strain 306) GN=XAC3344 PE=3 SV=1, 3mmt Fructose-bisphosphate aldolase, cd00948, FBP_aldolase_I_a |
| 10 | 3ek1 | 3i44 | http://www.sciencedirect.com/science/article/pii/S1359511316300393 | A computational integrating kinetic study on the flexible active site of human acetaldehyde dehydrogenase 1 | 2016 | Y Xu, J Lee, HS Yang, ZR L, H Mu, JM Yang - Process , 2016 - Elsevier | ... In the first step, binding pocket residues were calculated based on the 3D structure of ALDH1via the Pck pocket ... We found 25 template PDB structures (1a4s, 1bxs, 1euh, 1o04, 1t90, 1uxt,1uzb, 1wnd, 2d4e, 2imp, 2j6l, 2o2p, 2ve5, 2w8n, 3b4w, 3ed6, 3ek1, 3i44, 3ifg, 3jz4 ... |