We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 4WXT | 2014 | 4 |
| 5BNZ | 2015 | 4 |
| 4DI0 | 2012 | 4 |
| 4WBS | 2014 | 4 |
| 4MH4 | 2013 | 4 |
| 3JVI | 2009 | 4 |
| 6PTG | 2019 | 4 |
| 5BNT | 2015 | 4 |
| 3K2C | 2009 | 4 |
| 4JGB | 2013 | 4 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3gwc | 3hzg | https://pubs.acs.org/doi/abs/10.1021/acs.jpcb.6c01496 | The Impact of Second-Shell Residues on Substrate Binding at the Active Site of Thymidylate Synthase from Mycobacterium tuberculosis | 2026 | P Sengupta, P Satpati- The Journal of Physical Chemistry B, 2026 - ACS Publications | These structures indicate increased exposure of the active site between thermodynamics and structural characteristics ( to model the substrate-free MtbThyX, based on PDB 3HZG |
| 2 | 3hhe | - | https://www.pnas.org/doi/abs/10.1073/pnas.2608150123 | H2S-mediated protein persulfidation regulates redox metabolic flux underlying salt-stress resilience in rice | 2026 | Z Lin, M Zhou, X Ma, M Li, L Fu, H Li, Y Liu- Proceedings of the, 2026 - pnas.org | To further assess the structural implications, we generated a structure of a peroxidase from Chamaerops excelsa ( PDB -MODEL; RPIA, PDB 3HHE ) predicted that persulfidation at |
| 3 | 3o0h | - | http://s-space.snu.ac.kr/handle/10371/166700 | Structure of flavoprotein RclA from food-borne pathogens, and its molecular mechanism contributing to hypochlorous acid resistance | 2020 | - 2020 - s-space.snu.ac.kr | representation is labeled with residue numbers of three proteins (first RclA, second 3O0H , third 4M52). Page 36. 26 3.4 I searched for the closest protein to RclA in terms of structure using the DALI server (30). Mercuric reductase (MerA) ( PDB code: 4K7Z), a group II FDR |
| 4 | 3ek1 | - | http://inderscience.metapress.com/index/F88667Q47093367J.pdf | Conservation of water molecules in protein binding interfaces | 2012 | Z Li, Y He, L Cao, L Wong, J Li - International Journal of Bioinformatics Research and Applications, 2012 - Inderscience | ... Figure 6 Water-contacting structure of four aligned alanine residues in: a rat formyltetrahydrofolate dehydrogenase subunit interface (a, [PDB:2O2P]), and three betaine aldehyde dehydrogenase subunit interfaces (b[PDB:2WOX], c[PDB:1WNB] and d[PDB:3EK1]). ... |
| 5 | 3slg | 3swo, 3tk8, 4dz4, 5dle, 4lgo, 3t3w, 5bq2, 4lgv, 3l0g, 5kak, 4ghk, 3ld9, 5w15, 4q1t, 5udf, 4pca, 3hm0, 3inn, 3dah, 3i3f | https://link.springer.com/content/pdf/10.1007/978-981-10-7347-2.pdf#page=84 | 5.1 Creation of Homo Multimer Protein Complex Dataset | 2018 | P Kangueane, C Nilofer- Protein-Protein and Domain-Domain Interactions - Springer | 3LYU, 3M1R, 3MBH, 3MQ1, 3MW9, 3N2N, 3NWY, 3OVG, 3OZB, 3PW3, 3SBA, 3SLG , 3T3W, 3T94 Distribution of homo multimer protein complex structures at the protein data bank ( PDB ) 5.3 Structure of a homo trimer glycosidase (1AM7) from enterobacteria phage lambda is |
| 6 | 5tw7 | - | https://www.biorxiv.org/content/10.1101/808618v2.full-text | Helices on interdomain interface couple catalysis in the ATPPase domain with allostery in Plasmodium falciparum GMP synthetase | 2020 | S Shivakumaraswamy, N Pandey, L Ballut, S Violot- bioRxiv, 2020 - biorxiv.org | Experimental Procedures. Sequence and structure analysis The PDB IDs of the structures of GMPS analyzed are 1GPM (Escherichia coli), 3TQI (Coxiella burnetii), 2YWB and 2YWC (Thermus thermophilus), 5TW7 (Neisseria gonorrhoeae), 2VXO (Homo sapiens), 3UOW |
| 7 | 3sbx | - | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4979012/ | Structural basis for cytokinin production by LOG from Corynebacterium glutamicum | 2016 | H Seo, S Kim, HY Sagong, HF Son, KS Jin - Scientific , 2016 - ncbi.nlm.nih.gov | ... also showed that LOGs from C. purpurea (CpLOG, PDB CODE 5AJT, Z-score 26.8) and M.marinum (MmLOG, PDB CODE 3SBX, Z-score ... To compare CgLOG with other LOGs, wesuperposed the CgLOG structure with other LOG proteins such as AtLOG3, CpLOG, and ... |
| 8 | 4g6c | 4gnv | https://mspace.lib.umanitoba.ca/handle/1993/32221 | Understanding the structure and function of proteins involved in the inducible expression of AmpC -lactamase | 2013 | G Vadlamani - 2013 - mspace.lib.umanitoba.ca | Crystal structures of NagZ from Burkholderia cenocepacia were determined in complex with enzyme function was also explored by determining the crystal structure of a GH20 N-acetyl- |
| 9 | 2klx | - | http://rave.ohiolink.edu/etdc/view?acc_num=osu1554977217363556 | Studies in Computational Biochemistry: Applications to Computer Aided Drug Discovery and Protein Tertiary Structure Prediction | 2019 | ML Aprahamian - 2019 - rave.ohiolink.edu | structures were identified using a receiver operator characteristic (ROC) analysis and a set of known binding compounds. Using these structures as the receptors for structure -based drug discovery, a virtual screen was performed on the National Cancer Institute's ... The six proteins selected from the ab initio set were PDB ID 1tpm, 2klx, 2nc2, 2y4q, 3iql, and 4omo. |
| 10 | 6tz8 | - | https://theses.hal.science/tel-04464042/document | Caractrisation de lectines de champignons opportunistes mergents et identification de nouvelles lectines partir d'extraits fongiques | 2024 | T CREPIN, U KRENGEL, A de Palma, GJ BOONS - theses.hal.science | Cyanovirin-N (CV-N) is a small protein from the cyanobacterium Nostoc ellipsosporum that binds mannosides and possesses strong virucidal properties against a wide range of viruses (... C. neoformans (PDB ID: 6TZ8) and Coccidioides immitis (PDB ID: 5B8I) [148]. In all the fungal complexes, the overall fold of calcineurin was very similar |