We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 6NUP | 2019 | 0 |
| 6O3F | 2019 | 0 |
| 6O4N | 2019 | 0 |
| 6OE6 | 2019 | 0 |
| 6OHZ | 2019 | 0 |
| 3TRR | 2011 | 0 |
| 6OKH | 2019 | 0 |
| 6ONN | 2019 | 0 |
| 6OR9 | 2019 | 0 |
| 6OTJ | 2019 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3i4e | 3p0x | https://www.sciencedirect.com/science/article/pii/S0006291X20318970 | Biochemical properties and crystal structure of isocitrate lyase from Bacillus cereus ATCC 14579 | 2020 | SH Lee, D Ki, S Kim, IK Kim, KJ Kim- Biochemical and Biophysical, 2020 - Elsevier | 2.5. Structure determination of BcICL. The structure of BcICL was determined using the molecular replacement method with the CCP4 version of MOLREP [24]. The structure of Isocitrate lyase from Burkholderia pseudomallei ( PDB code 3I4E ) was used as a search model |
| 2 | 4lgv | - | https://www.sciencedirect.com/science/article/pii/S0006291X21003016 | Structural basis for substrate recognition of glucose-6-phosphate dehydrogenase from Kluyveromyces lactis | 2021 | HH Vu, C Jin, JH Chang- Biochemical and Biophysical Research, 2021 - Elsevier | The overall structure of Kluyveromyces lactis G6PD (cyan), Homo sapiens G6PD ( PDB code, 2BHL; red), Trypanosoma cruzi code, 6D23; yellow), Leuconostoc mesenteroides G6PD ( PDB code, 1DPG; purple), and Mycobacterium avium G6PD ( PDB code, 4LGV ; green) |
| 3 | 3gwc | - | https://www.sciencedirect.com/science/article/pii/S0006349520308894 | Mechanism of naphthoquinone selectivity of thymidylate synthase ThyX | 2020 | H Myllykallio, HF Becker, A Aleksandrov- Biophysical Journal, 2020 - Elsevier | to be very small, less than 0.1 kcal mol 1 . To model C8-C1 in complex with ThyX from Mtb, the C8-C1 ligand from the crystal structure from PBCV-1 was retained after superimposing the crystal structures from ThyX and PBCV-1( PDB : 4FZB, 3GWC ) using the |
| 4 | 2kn9 | - | https://www.sciencedirect.com/science/article/pii/S0010854517303119 | Rubredoxins derivatives: Simple sulphur-rich coordination metal sites and its relevance for biology and chemistry | 2017 | BK Maiti, RM Almeida, I Moura, JJG Moura- Coordination Chemistry, 2017 - Elsevier | Rubredoxins (Rds) and their derivatives have been extensively used, in the last few decades, in order to elucidate structure and functional aspects of metal sit. |
| 5 | 6nb6 | - | https://www.sciencedirect.com/science/article/pii/S0021925817484729 | SARS-CoV-2 (COVID-19) structural and evolutionary dynamicome: Insights into functional evolution and human genomics | 2020 | R Gupta, J Charron, CL Stenger, J Painter- Journal of Biological, 2020 - Elsevier | receptor structure -function. post-translational modification (PTM). COVID-19. severe acute respiratory coronavirus 2 (SARS-CoV-2) Their 2633-kb genome consists of positive-sense, single-stranded RNA, coding for nonstructural and structural proteins This protein complex model was built through the integration of PDB structures 6CRW, 6NB6, and 5X58 for the trimer of spike proteins with 6M17, |
| 6 | 5ucm | - | https://www.sciencedirect.com/science/article/pii/S002192581750441X | Human trans-editing enzyme displays tRNA acceptor-stem specificity and relaxed amino acid selectivity | 2020 | O Vargas-Rodriguez, M Bakhtina, D McGowan- Journal of Biological, 2020 - Elsevier | Corrections to the resulting alignment were made based on the structural alignment of Cc ProXp-ala (Protein Data Bank entry 5VXB) and Pa ProRS (Protein Data Bank entry 5UCM). |
| 7 | 5i0p | - | https://www.sciencedirect.com/science/article/pii/S0021925820000964 | Metallo--lactamase domain-containing protein 2 is S-palmitoylated and exhibits acyl-CoA hydrolase activity | 2021 | MIP Malgapo, JM Safadi, ME Linder- Journal of Biological Chemistry, 2021 - Elsevier | JavaScript is disabled on your browser. Please enable JavaScript to use all the features on this page. Skip to main content Skip to article |
| 8 | 3nf4 | - | https://www.sciencedirect.com/science/article/pii/S0021925820340461 | Crystal structures of TdsC, a dibenzothiophene monooxygenase from the thermophile Paenibacillus sp. A11-2, reveal potential for expanding its substrate | 2017 | T Hino, H Hamamoto, H Suzuki, H Yagi- Journal of Biological, 2017 - Elsevier | 2B). This domain architecture and quaternary structure are also seen for the acyl-CoA dehydrogenase superfamily (25), and the structure of TdsC is very similar to that of DszC (2122, 23 Structure of FMN-bound TdsC FMN binding to TdsC resulted in no global structural changes |
| 9 | 2n6t | 2n6w, 2n6x, 2n6s | https://www.sciencedirect.com/science/article/pii/S0022283617304680 | F-RAG: Generating Atomic Coordinates from RNA Graphs by Fragment Assembly | 2017 | S Jain, T Schlick- Journal of molecular biology, 2017 - Elsevier | Table 1. List of 50 RNA PDB files whose 3D structures were generated in this paper. PDB , Residues, Molecule, Structure . 2M4W, 17, HEV genome bulge, Hairpin, internal loop 2N6T , 42, CssA mRNA thermometer top, Hairpin, internal loops |
| 10 | 4q4l | - | https://www.sciencedirect.com/science/article/pii/S0022283618302353 | Integrating cross-linking experiments with ab initio protein-protein docking | 2018 | T Vreven, DK Schweppe, JD Chavez, CR Weisbrod- J Mol Biol. 2018 Jun 8;430(12):1814-1828. | For the resulting complex list, we then searched the PDB for unbound structures A method for integrative structure determination of protein-protein complexes 2636. [13] Pons C, D'Abramo M, Svergun DI, Orozco M, Bernad P, Fernandez-Recio J. Structural characterization of |