We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
Structure | Year released | #citations |
---|---|---|
2KWL | 2010 | 9 |
2KOK | 2009 | 9 |
2KN9 | 2009 | 10 |
2KLX | 2009 | 4 |
2KHR | 2009 | 5 |
2KHP | 2009 | 9 |
# | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
---|---|---|---|---|---|---|---|
1 | 3knu | - | http://scholarscompass.vcu.edu/etd/2725/?show=full | Dynamics of substrate interactions in tRNA (m1G37) methyltransferase: Implications for drug discovery | 2012 | MK Palesis - 2012 - scholarscompass.vcu.edu | ... The secondary structure of specific sequences is illustrated above the alignment. ... Page 29. 9 Figure6. Structural alignment of TrmD from different bacterial species: Anaplasma phagocytophilum(royal blue, PDB ID: 3KNU), Bartonella henselae (cyan, PDB ID: 31EF ... |
2 | 3kjr | - | http://pubs.acs.org/doi/abs/10.1021/ci300349s | Are homology models sufficiently good for free-energy simulations? | 2012 | S Genheden - Journal of chemical information and modeling, 2012 - ACS Publications | ... factor IXa (pdb code: 1rfn(36)) with 44% sequence identity and protein C (pdb code: 1aut ... Suitable template proteins for dhfr were found by a FASTA search(38) of the protein databank. ... The results of the FASTA search are summarized in Table 1. Finally, 2bl9, 3kjr, and 2oip were ... |
3 | 3khw | - | http://repositorio.ufpa.br/jspui/handle/2011/6781 | Caracterização dos genes codificadores da hemaglutinina e PB2 do vírus Influenza A (H1N1) pandêmico isolado na mesorregião metropolitana de Belém | 2012 | JA FERREIRA - 2012 - repositorio.ufpa.br | ... LACEN Laboratório Central MDCK Cultura de células de rim canino (Madin Darbin Canine Kidney)Mrna Ácido ribonucléico mensageiro M631L Substituição no aminoácido 631 de uma metioninapor uma leucina OMS Organização Mundial da Saúde PDB Banco de dados de ... |
4 | 3khw | - | http://www.pjps.pk/wp-content/uploads/pdfs/27/3/SUP-41.pdf | 3D protein structure prediction of influenza A virus based on optimization genetic algorithm. | 2014 | J Gao, PX Jin, HX Xu - Pakistan journal of pharmaceutical sciences, 2014 - pjps.pk | ... acid residues Sixty groups of influenza A (H1N1) virus protein were selected from PDB database, 3HTO, 4F15, 3B7E, 3BEQ, 3HTP, 3HTQ, 3HTT, 4EDB, 4B7N, 4B7M, 3M5R, 3M8A, 3LKN, 3QQ4, 3QQ3, 3TI3, 3LZF, 3M6S, 3UBE, 3UBJ, 3UBN-A, 4D9J, 3GBN, 3KHW, 4EDA, 2ZKO ... |
5 | 3khp | - | https://link.springer.com/content/pdf/10.1186/s12866-020-01763-1.pdf | Proteinprotein interaction of Rv0148 with Htdy and its predicted role towards drug resistance in Mycobacterium tuberculosis | 2020 | G Bhargavi, S Hassan, S Balaji, SP Tripathy- BMC microbiology, 2020 - Springer | Rv0148 and Htdy interaction analysis The crystallographically determined structure of Htdy ( PDB code 3KHP ) and the predicted model structure of Rv0148 were used for docking using the ClusPro server b Ramachandran plot for the predicted model structure of Rv0148 |
6 | 3khp | - | http://scripts.iucr.org/cgi-bin/paper?rl5046 | Cloning, overexpression, purification, crystallization and preliminary X-ray diffraction analysis of Rv0241c (HtdX) from Mycobacterium tuberculosis H37Rv | 2013 | R Biswas, D Dutta, AK Das - Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 2013 - scripts.iucr.org | ... PDB entry, Identity (%), Query cover (%), Reference. 1pn2, 47, 10, Koski et al. (2004 [Koski, MK, Haapalainen, AM, Hiltunen, JK & Glumoff, T. (2004). ... F66, 272-274.] ). 3khp, 36, 19, Seattle Structural Genomics Center for Infectious Disease (unpublished work). 3oml, 33, 37, Haataja ... |
7 | 3ke1 | - | http://onlinelibrary.wiley.com/doi/10.1002/cmdc.201000083/full | Thiazolopyrimidine Inhibitors of 2‐Methylerythritol 2, 4‐Cyclodiphosphate Synthase (IspF) from Mycobacterium tuberculosis and Plasmodium falciparum | 2010 | JG Geist, S Lauw, V Illarionova, B Illarionov, et al. ChemMedChem (2010) 5:1092-1101 | ...[11] T.E. Edwards, D.R. Davies, R. Hartley, W. Zeller, unpublished results. PDB code: 3KE1.... |
8 | 3ke1 | 4emd, 4ed4, 4dxl, 3q8h | http://onlinelibrary.wiley.com/doi/10.1002/anie.201408487/full | Molecular Recognition in Chemical and Biological Systems | 2015 | E Persch, O Dumele, F Diederich - … Chemie International Edition, 2015 - Wiley Online Library | ... c) Cocrystal structure of ligand 12 bound to TGT (1.68 Å resolution, PDB ID: 3RR4)51 and d ...reorganization of the protein and the changes in the water network solvation occurring upon minorchanges in the ligand structures.52 Without high-resolution structural information, a ... |
9 | 3ke1 | 4dxl, 4ed4, 4emd, 3q8h | http://onlinelibrary.wiley.com/doi/10.1002/ange.201408487/full | Molekulare Erkennung in chemischen und biologischen Systemen | 2015 | E Persch, O Dumele, F Diederich - Angewandte Chemie, 2015 - Wiley Online Library | ... c) Bindungsmodus der Liganden 27 und 28 im Komplex mit BpIspF (27: 2.05 Å Auflösung, PDB ID: 3KE1; 28: 1.75 Å Auflösung, PDB ID: 3Q8H). ... |
10 | 3ke1 | - | http://pubs.acs.org/doi/full/10.1021/jm3016816 | Torsion Angle Preferences in Druglike Chemical Space: A Comprehensive Guide | 2013 | C Sch?rfer, T Schulz-Gasch, HC Ehrlich? - Journal of medicinal ?, 2013 - ACS Publications | ... The growing number of entries in the Cambridge Structural Database (CSD)(19) and the ProteinData Bank (PDB)(20) allow derivation of more and more reliable and specific rules, and efficient tools exist to do this.(21, 22) Here we present ... PDB entry 3ke1(39) exemplifies ... |