We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 6UH2 | 2019 | 0 |
| 6UJD | 2019 | 0 |
| 6ULO | 2019 | 0 |
| 6UWQ | 2020 | 0 |
| 6V45 | 2019 | 0 |
| 6V77 | 2020 | 0 |
| 6V91 | 2020 | 0 |
| 6VH5 | 2020 | 0 |
| 5SCS | 2022 | 0 |
| 6VS4 | 2020 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 4ohc | - | http://bq.facmed.unam.mx/tab/wp-content/uploads/2020/06/9-Gonzalez-Segura.pdf | Orotato fosforribosiltransferasa. Pasado, presente y futuro en el estudio estructural de las protenas. | 2020 | L Gonzlez-Segura, EI Carrizosa-Carbajal - bq.facmed.unam.mx | Past, present and future in the structural study of proteins Key words: Phosphoribosyltransferase; three- dimensional structure ; conformational change; inhibition; pyrimidines synthesis str (PDBs 3M3H y 4RV4), de Burkholderia cenocepacia ( PDB 4OHC ), de Corynebacterium |
| 2 | 6vyb | - | https://pdfs.semanticscholar.org/7a8c/b4cb523ba6ce60d7e87c02e8558c13363b41.pdf | Comparative docking studies on curcumin with COVID-19 proteins | 2020 | R Suravajhala, A Parashar, B Malik, VA Nagaraj - 2020 - pdfs.semanticscholar.org | were subjected to a 3D structure generation on CORINA [12] using their SMILE Preparation of proteins and grid parameters: The protein data bank ( PDB ) structures of different proteins were retrieved from RCSB membrane protein (6M17), polymerase (6M71), spike ( 6VYB ) |
| 3 | 3p96 | - | https://www.sciencedirect.com/science/article/pii/S0006291X20314042 | Biochemical characterization of phosphoserine phosphatase SerB2 from Mycobacterium marinum | 2020 | E Pierson, J Wouters- Biochemical and Biophysical Research, 2020 - Elsevier | MmaSerB2 and MtbSerB2 are similar in their catalytic behaviour and architecture . Fig. 2. A) Structure of MmaSerB2 modeled by homology on the basis of M. avium SerB structure ( PDB 3P96 ). The individual domains are labelled. Active site residues are shown in red |
| 4 | 5umh | - | https://pubs.acs.org/doi/abs/10.1021/acs.jcim.0c00802 | Estimating Change in Foldability Due to Multipoint Deletions in Protein Structures | 2020 | A Banerjee, A Kumar, KK Ghosh- Journal of Chemical, 2020 - ACS Publications | Figure S6: Root mean-square fluctuation of each residue of the protein in its original conformation (in magenta) and of the protein subject to MPD in residue stretches in the nonloop region (in sea green) for PDB IDs: 4XGQ chain A, 5UMH chain A, 4A5M chain A, 3GUD chain A, and... |
| 5 | 4f82 | 4f4a | http://search.proquest.com/openview/afda5488243a36c7973c912298122359/1?pq-origsi... | Investigating Imatinib-Resistant Mutations in Abl Kinase | 2020 | A Lyczek - 2020 - search.proquest.com | 10 *(52& Illustration of important structural features of imatini< |
| 6 | 3ixc | - | https://www.frontiersin.org/articles/10.3389/fmicb.2020.00742/full?report=reader | Crystal structure and active site engineering of a halophilic -carbonic anhydrase | 2020 | M Vogler, R Karan, D Renn, A Vancea- Frontiers in, 2020 - frontiersin.org | (C) The surface potential of CA_D compared to mesophilic -CA homologs (Escherichia coli, 3tio; Salmonella enterica, 3r3r; Anaplasma phagocytophilum, 3ixc ; Bacillus cereus, 1xhd (A) CA_D (crystal structure ), (B) Cam (crystal structure ) from M. thermophila ( PDB ID: 1qrg |
| 7 | 6bfu | 6nb4 | https://www.biorxiv.org/content/10.1101/2020.03.04.976258v1.abstract | Cryo-electron microscopy structure of the SADS-CoV spike glycoprotein provides insights into an evolution of unique coronavirus spike proteins | 2020 | S Ouyang- BioRxiv, 2020 - biorxiv.org | lower and outer side of S1-CTDs arranged as a big triangle. This architecture , 157 ie, CTD sandwiched by its own NTD and the adjacent NTD, comes into being 158 189 (G). Cryo-EM structure of SADS-CoV S monomeric subunit. The structural 190 |
| 8 | 3p96 | - | https://www.mdpi.com/1420-3049/25/2/415 | Identification and Repurposing of Trisubstituted Harmine Derivatives as Novel Inhibitors of Mycobacterium tuberculosis Phosphoserine Phosphatase | 2020 | E Pierson, M Haufroid, TP Gosain, P Chopra, R Singh- Molecules, 2020 - mdpi.com | SerB2 model generated by homology modeling based on the crystal structure of Mycobacterium avium SerB (Protein Data Bank ( PDB ) entry 3P96 ) is in The docked structure of the best inhibitor, compound 124, is shown in Figure 4. Analysis of those structures shows that |
| 9 | 6ws6 | - | https://www.sciencedirect.com/science/article/pii/S1931312820303620 | Neutralizing antibody and soluble ACE2 inhibition of a replication-competent VSV-SARS-CoV-2 and a clinical isolate of SARS-CoV-2 | 2020 | JB Case, PW Rothlauf, RE Chen, Z Liu, H Zhao- Cell host &, 2020 - Elsevier | Using an infectious molecular clone of vesicular stomatitis virus (VSV) expressing eGFP as a marker of infection, we replaced the glycoprotein gene (G) with the spike protein of SARS-CoV-2 (VSV-eGFP-SARS-CoV-2) and developed a high-throughput-imaging-based neutralization assay at biosafety level 2 ... VIR antibody set Pinto et al., 2020 S309 PDB: 6WS6 |
| 10 | 3qh4 | - | https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0226838 | Crystal structure of PMGL2 esterase from the hormone-sensitive lipase family with GCSAG motif around the catalytic serine | 2020 | KM Boyko, MV Kryukova, LE Petrovskaya- PloS one, 2020 - journals.plos.org | mPMGL2 demonstrated no structural or biochemical differences compared to the wild type enzyme, but with the atomic coordinates of the esterase EstE5 from uncultured bacterium ( PDB ID: 3L1H The wtPMGL2 structure was then used to solve mPMGL2 at 1.43 resolution... Besides the above mentioned enzymes, the only known structure of an enzyme from the GTSAG subfamily of bHSL is an esterase LipW from Mycobacterium marinum (PDB ID 3QH4), whose proposed dimer also shares the same structural feature |