We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 6V45 | 2019 | 0 |
| 6V77 | 2020 | 0 |
| 6V91 | 2020 | 0 |
| 6VH5 | 2020 | 0 |
| 6VS4 | 2020 | 0 |
| 6W15 | 2020 | 0 |
| 6W2O | 2020 | 0 |
| 6W6A | 2020 | 0 |
| 6W80 | 2020 | 0 |
| 6WBD | 2020 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 4oj7 | - | http://www.repositorio.ufop.br/handle/123456789/8872 | Identificao de protenas exclusivas de fitopatgenos da famlia Xanthomonadaceae: uso de genmica comparativa para identificao de novos alvos de combate. | 2016 | RAB Assis - 2016 - repositorio.ufop.br | Pro Prolina Ser Serina Thr Treonina Phe Fenilalanina Trp Triptofano Tyr Tirosina CAZy Carbohydrate active enzyme PDB Protein Data Bank Page 14. X RESUMO A famlia Xanthomonadaceae compreende espcies diferentes de proteobactrias no |
| 2 | 3gtd | 3qbp, 3rrp | http://www.teses.usp.br/teses/disponiveis/60/60136/tde-15052014-084203/publico/T... | Structural and functional characterization of Trypanosoma cruzi fumarate hydratase isoforms | 2014 | RAP de Pdua - teses.usp.br | ... TcFHs structural models, built by homology modeling using the Leishmania major fumarase crystalstructure as template, were compared to ... Keywords: fumarase, fumarate hydratase, Chagas disease,selective inhibitors, crystal structure. ... The fainter structures correspond to the ... |
| 3 | 2khp | - | https://etd.ohiolink.edu/!etd.send_file?accession=akron1460988438&disposition=at... | Identifying selective ligands for glutaredoxin proteins with fragment based drug design approach and optimization of the bacterial selective hits | 2016 | RB Khattri - 2016 - etd.ohiolink.edu | ...These were compared to structures deposited in the Protein Data Bank (RCSB PDB). The PBD name for the BrmGRX is 2KHP (Leeper et. al, 2011) and hGRX1 is 1JHB (Sun et. al, 1998).. ... |
| 4 | 2khp | - | http://www.mdpi.com/1420-3049/21/7/846/htm | An NMR-guided screening method for selective fragment docking and synthesis of a warhead inhibitor | 2016 | RB Khattri, DL Morris, CM Davis, SM Bilinovich - Molecules, 2016 - mdpi.com | ... The active site architecture of BrmGRX matches with the proposed GRX consensus active sitestructure which suggests the N ... Structures of target proteins were obtained from the Protein DataBank (PDB) [63]. The PBD code for BrmGRX is 2KHP and hGRX1 is 1JHB [19,64]. ... |
| 5 | 2khp | - | https://www.mdpi.com/1420-3049/25/1/147 | Identifying Ortholog Selective Fragment Molecules for Bacterial Glutaredoxins by NMR and Affinity Enhancement by Modification with an Acrylamide Warhead | 2020 | RB Khattri, DL Morris, SM Bilinovich, E Manandhar- Molecules, 2020 - mdpi.com | between the two domains, the presence of multiple paralogs in one or both species, and a lack of conserved genomic architecture between the Structural comparison of hGRX1 to E. coli GRX and BrmGRX indicated similarities in the overall fold and structure ... NMR backbone resonance assignments for BrmGRX (2KHP) and hGRX1 (1JHB) were obtained from the BMRB |
| 6 | 6x79 | - | https://www.biorxiv.org/content/10.1101/2021.02.25.432861v3.abstract | Antiviral Resistance against Viral Mutation: Praxis and Policy for SARS CoV-2 | 2021 | RC Penner- BioRxiv, 2021 - biorxiv.org | E of rotations of BHBs in HQ60; Table 1, Protein Data Bank structure files upon The methods of this paper are im- plented online from an uploaded PDB file at et al., Hydrogen bond rotations as a uniform structural tool for analyzing protein architecture , Nature Communications, 5 |
| 7 | 3ue9 | - | http://scripts.iucr.org/cgi-bin/paper?S1744309113021921 | Purification, crystallization and preliminary X-ray analysis of adenylosuccinate synthetase from the fungal pathogen Cryptococcus neoformans | 2013 | RD Blundell, SJ Williams, CA Morrow? - Acta Crystallographica Section F Structural Biology and Crystallization Communications, 2013 - scripts.iucr.org | ... Zhou, S. Peterson, W. Anderson & A. Joachimiak, unpublished work), Campylobacter jejuni (43% identity; PDB entry 3r7t ; Center for Structural Genomics of Infectious Diseases, unpublished work) and Burkholderia thailandensis (40% identity; PDB entry 3ue9 ; Seattle Structural ... |
| 8 | 7ral | - | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10769253/ | Broadly neutralizing antibody induction by non-stabilized SARS-CoV-2 Spike mRNA vaccination in nonhuman primates | 2023 | RD Malewana, V Stalls, A May, X Lu, DR Martinez- bioRxiv, 2023 - ncbi.nlm.nih.gov | Our structural studies identified the DH1193 epitope as one of these conserved epitopes on in PDB : 8DPZ, 8DTK, 7RAL . Materials are available with a Materials transfer agreement. |
| 9 | 7ral | - | https://www.science.org/doi/abs/10.1126/scitranslmed.adn5651 | Nonstabilized SARS-CoV-2 spike mRNA vaccination induces broadly neutralizing antibodies in nonhuman primates | 2025 | RD Malewana, V Stalls, A May, X Lu- Science Translational, 2025 - science.org | Our structural studies identified the DH1193 epitope as one of these conserved epitopes on accession numbers 8DPZ, 8DTK, and 7RAL in the PDB . Biospecimens, proteins, DNA, and |
| 10 | 7k45 | - | https://www.nature.com/articles/S41591-021-01294-w | Resistance of SARS-CoV-2 variants to neutralization by monoclonal and serum-derived polyclonal antibodies | 2021 | RE Chen, X Zhang, JB Case, ES Winkler, Y Liu- Nature medicine, 2021 - nature.com | Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has caused the global COVID-19 pandemic. Rapidly spreading SARS-CoV-2 variants may jeopardize newly introduced antibody and vaccine countermeasures. Here, using monoclonal antibodies (mAbs), animal ... Structures of the SARS-CoV-2 RBD in complex with a representative neutralizing antibody from (a) class 1 (S2E12, PDB: 7K45), or (b) class 2 (S309, PDB: 6WPS). |