We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 6ULO | 2019 | 0 |
| 6UWQ | 2020 | 0 |
| 6V45 | 2019 | 0 |
| 6V77 | 2020 | 0 |
| 6V91 | 2020 | 0 |
| 6VH5 | 2020 | 0 |
| 6VS4 | 2020 | 0 |
| 6W15 | 2020 | 0 |
| 6W2O | 2020 | 0 |
| 6W6A | 2020 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 5ez3 | - | https://f1000research.com/articles/9-1268 | Characterization of sulfated polysaccharide activity against virulent Plasmodium falciparum PHISTb/RLP1 protein | 2020 | JM Mutisya, VA Mobegi, JK Kinyua, MN Kivecu- , 2020 - f1000research.com | sequences to the reference, 12 non-synonymous single nucleotide polymorphisms were considered for mutant protein structure analysis. Eleven drug compounds with antiplasmodial activity were identified. Both modelled PHISTb/RLP1 reference and mutant structures had a |
| 2 | 6nb6 | - | https://www.sciencedirect.com/science/article/pii/S0092867420307571 | Structures of human antibodies bound to SARS-CoV-2 spike reveal common epitopes and recurrent features of antibodies | 2020 | CO Barnes, AP West Jr, KE Huey-Tubman- Cell, 2020 - Elsevier | Share. Export. Advanced. Cell Cell. Volume 182, Issue 4, 20 August 2020, Pages 828-842.e16. Journal home page for Cell. Article. Structures of Human Antibodies Bound to SARS-CoV-2 Spike Reveal Common Epitopes and Recurrent Features of Antibodies |
| 3 | 2lwk | - | https://www.frontiersin.org/articles/10.3389/fchem.2020.00107/full?utm_source=S-... | Exploring the RNA-Recognition Mechanism Using Supervised Molecular Dynamics (SuMD) Simulations: Toward a Rational Design for Ribonucleic-Targeting | 2020 | M Bissaro, M Sturlese, S Moro- Frontiers in Chemistry, 2020 - frontiersin.org | (B) Superimposition between the experimental NMR complex ( PDB ID 2LWK , green-colored DPQ (D) RMSD of RNA phosphate atoms belonging to the backbone, computed against the PDB reference. (E) Flexibility characterizing the RNA structure during DPQ binding event |
| 4 | 3u04 | - | https://books.google.com/books?hl=en&lr=&id=odPbDwAAQBAJ&oi=fnd&pg=PP1&dq=%223U0... | Drug Repurposing in Cancer Therapy: Approaches and Applications | 2020 | KKW To, WCS Cho - 2020 - books.google.com | Page 1. Drug RE pu irposir g in Approaches and Applications Edited by Kenneth K. W. To William CS Cho MEDIA BUSINESS WORLD TUORK $60CM WORLD so OH HC E ENT N-Cro C CI AP CH3 Page 2. DRUG REPURPOSING IN CANCER THERAPY Page 3 |
| 5 | 3u0g | - | https://link.springer.com/article/10.1007/s00253-020-10369-6 | Structural insight into the substrate specificity of PLP fold type IV transaminases | 2020 | EY Bezsudnova, VO Popov, KM Boyko- Applied Microbiology and, 2020 - Springer | Due to the rigid structure of the -sheet, the residues constituting it form a peculiar mold for substrate binding. The interdomain loop (light blue) and -turn (black) of the large domain of the first subunit confine the P-pocket from the other sides PDB ID:*. X-strand 3U0G |
| 6 | 2lwk | - | https://chemrxiv.org/ndownloader/files/25634519 | DrugPred_RNAStructure-based druggability predictions for RNA binding sites | 2020 | IH Rekand, R Brenk - 2020 - chemrxiv.org | However, the structure of the complex has been determined by NMR and it is possible that the resolution of the structure is not accurate enough to reveal the actual details of the binding mode.51 The Spinach Figure 6: Binder of influenza A promoter region ( PDB ID 2lwk ) |
| 7 | 4yl5 | - | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7093009/ | Essential Metabolic Routes as a Way to ESKAPE from Antibiotic Resistance | 2020 | ALC Barra, CD Lvia de Oliveira, LG Moro- Frontiers in Public, 2020 - ncbi.nlm.nih.gov | ID 2I5B (23)], Thermus thermophilus ( PDB ID 1UB0), A. baumannii ( PDB ID 4YL5 ), Bacteroides thetaiotaomicron tuberculosis (3O63), and for the bifunctional enzyme from Candida glabrata [ PDB IDs 3NL2 No crystal structure of an ESKAPE pathogen, ThiE, is available to date |
| 8 | 5k85 | - | https://onlinelibrary.wiley.com/doi/abs/10.1002/bio.3952 | Selective inhibition of Zophobas morio (Coleoptera: Tenebrionidae) luciferaselike enzyme luminescence by diclofenac and potential suitability for lightoff | 2020 | MC Carvalho, A Tomazini, RA Prado- Luminescence, 2020 - Wiley Online Library | tertiaricarbonis PDB file ID: 6HE0, Cryptococcus neoformans PDB file ID: 5K85 , Salmonella typhimurium PDB file ID: 5JRH) indicated that, among the five binding sites, that of CoA was structure and function prediction. Nat Protoc 2010; 5: 25-738. 49 |
| 9 | 5dld | 4hwg | https://www.teses.usp.br/teses/disponiveis/76/76132/tde-29092020-091852/en.php | UDP-N-acetilglicosamina 2-epimerase de Staphylococcus aureus: estrutura, dinmica e prospeco de novos ligantes | 2020 | C Azevedo - teses.usp.br | the crystallographic structure of the enzyme to characterize conformational changes as they 45 Figura 13 Estrutura cristalogrfica da cadeia A da protena UDP-GlcNac 2-epimerase de S. aureus ( PDB : 5ENZ), com uma molcula de UDP em stio ativo, vista de frente (A) e |
| 10 | 5vog | - | https://scripts.iucr.org/cgi-bin/paper?ba5306 | ALIXE: a phase-combination tool for fragment-based molecular replacement | 2020 | C Milln, E Jimnez, A Schuster- Section D: Structural, 2020 - scripts.iucr.org | 2.4.1. Hypothetical protein ( PDB entry 5vog ). The crystal structure of a hypothetical protein from Neisseria gonorrhoeae with bound ppGpp was downloaded from the PDB ( PDB entry 5vog ; Seattle Structural Genomics Center for Infectious Disease, unpublished work) |