We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 7TCM | 2022 | 0 |
| 7TAT | 2022 | 0 |
| 7TAS | 2022 | 0 |
| 5SCT | 2022 | 0 |
| 7TA9 | 2022 | 0 |
| 6XEP | 2020 | 0 |
| 6XNQ | 2020 | 0 |
| 6XR5 | 2020 | 0 |
| 7T93 | 2022 | 0 |
| 7T7J | 2022 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3d64 | - | http://journals.iucr.org/f/issues/2014/11/00/bo5136/bo5136bdy.html | Crystallization and preliminary X-ray diffraction analysis of the S-adenosylhomocysteine hydrolase (SAHH) from Thermotoga maritima | 2014 | M He, Y Zheng, CH Huang, G Qian, X Xiao… - Structural Biology and …, 2014 - journals.iucr.org | ... 17, 2134-2144.] ), Burkholderia pseudomallei (PDB entry 3d64 ; Seattle Structural GenomicsCenter for Infectious Disease, unpublished work), Trypanosoma ... This model was generated fromthe structure of Mycobacterium tuberculosis SAHH (PDB entry 3dhy ; 43 ... |
| 2 | 3hja | - | http://scripts.iucr.org/cgi-bin/paper?us5057 | Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of glyceraldehyde-3-phosphate dehydrogenase from Streptococcus | 2014 | R Nagarajan, K Ponnuraj - Acta Crystallographica Section F: , 2014 - scripts.iucr.org | ... 246, 511-521.] ), Borrelia burgdorferi (PDB entry 3hja ; Seattle Structural Genomics Center for Infectious Disease, unpublished work) and E. coli (PDB entry 1s7c ; Berkeley Structural Genomics Center, unpublished work) and fungal species as Saccharomyces cerevisiae (PDB ... |
| 3 | 4lsm | - | http://www.sciencedirect.com/science/article/pii/S1570963914000296 | Biochemical characterisation of glyceraldehyde 3-phosphate dehydrogenase (GAPDH) from the liver fluke, Fasciola hepatica | 2014 | VL Zinsser, EM Hoey, A Trudgett, DJ Timson - Biochimica et Biophysica …, 2014 - Elsevier | ... other parasites, for example Plasmodium falciparum (PDB: 1YWG [52]; rmsd 1.226 Å over 8358equivalent atoms) Trypanosoma brucei (PDB: 2X0N, [53]; rmsd 2.009 Å over 8522 equivalentatoms) and Trypanosoma cruzi (PDB: 4LSM, note that this structure only contains ... |
| 4 | 4h3e | - | http://onlinelibrary.wiley.com/doi/10.1002/qua.24650/full | A theoretical study on the reaction pathways of peroxynitrite formation and decay at nonheme iron centers | 2014 | AA Attia, R Silaghi-Dumitrescu - International Journal of Quantum Chemistry, 2014 - Wiley Online Library | ... The quantum chemical calculations were performed on four chemical models. These models comprised the active sites of SOR from Pyrococcus furiosus (PDB id 1DQI) and FeSOD from Trypanosoma cruzi (PDB id 4H3E) in their ferrous and ferric forms. ... |
| 5 | 4djt | - | http://link.springer.com/chapter/10.1007/978-3-7091-1806-1_2 | The Structure of the G Domain of the Ras Superfamily | 2014 | IR Vetter - Ras Superfamily Small G Proteins: Biology and …, 2014 - Springer | ... series) (24 PDB files, 31 chains). ... The structure of an orthologue of Ran from Encephalitozooncuniculi (4djt, unpublished) has all GTP-interacting motifs including the catalytic glutamineconserved. It was crystallized in the GDP-bound form. ... Structure/Fold Des 15(12):1618–1629. |
| 6 | 3ngf | - | http://link.springer.com/article/10.1007/s13205-014-0274-1 | Structure-based function analysis of putative conserved proteins with isomerase activity from Haemophilus influenzae | 2014 | M Shahbaaz, F Ahmad, MI Hassan - 3 Biotech, 2014 - Springer | ... was used for structure- based function annotation and for predicting structural motifs associated ...by DALI server that compares the target structure with known structure submitted in PDB. Thesecondary structure elements are computed from atomic resolution protein structures of ... |
| 7 | 3o2e | - | http://onlinelibrary.wiley.com/doi/10.1111/mmi.12649/full | Morphogenes bolA and mreB mediate the photoregulation of cellular morphology during complementary chromatic acclimation in Fremyella diplosiphon | 2014 | SP Singh, BL Montgomery - Molecular microbiology, 2014 - Wiley Online Library | ... Hypo, gene encodes hypothetical protein. C. Putative structure of F. diplosiphon BolA (in green) modelled on the Babesia bovis BolA structure (in red, PDB:3O2E; Abendroth et al., 2011) using two independent protein structure prediction servers, ie I-TASSER and PHYRE. ... |
| 8 | 4hec | - | http://www.sciencedirect.com/science/article/pii/S0969212614000744 | Structure and Function of RNase AS, a Polyadenylate-Specific Exoribonuclease Affecting Mycobacterial Virulence In Vivo | 2014 | M Romano, R van de Weerd, FCC Brouwer - Structure, 2014 - Elsevier | ... Structural features of the enzyme resemble those of an independently determined structure reported in the Protein Data Bank while our functional characterization was ongoing (PDB code 4HEC) (Abendroth et al., 2014). ... |
| 9 | 3r1i | - | http://journals.iucr.org/f/issues/2014/10/00/no5061/no5061bdy.html | Structure of a short-chain dehydrogenase/reductase (SDR) within a genomic island from a clinical strain of Acinetobacter baumannii | 2014 | BS Shah, SG Tetu, SJ Harrop, IT Paulsen… - Structural Biology and …, 2014 - journals.iucr.org | ... [Figure 2], Figure 2 Structure of SDR ... 4g81 ; pale red), 3-oxoacyl-(ACP) reductase (Synechococcuselongatus FabG2; PDB entry 4dmm ; pale green), 3-oxoacyl-(ACP) reductase (S. aureus FabG3;PDB entry 3osu ; pale blue), M. marinum SDR (PDB entry 3r1i ; pale yellow ... |
| 10 | 3cxk | - | http://onlinelibrary.wiley.com/doi/10.1002/pmic.201300357/full | Unraveling the specificities of the different human methionine sulfoxide reductases | 2014 | E Vandermarliere, B Ghesquire, V Jonckheere - , 2014 - Wiley Online Library | ... In a first step, all human protein structures determined by X-ray crystallography were retrieved from the Protein Data Bank (PDB) [30]. ... With the aid of a BLAST search [33] against the PDB, the possible templates were shortlisted and PDB-entry 3CXK [34] was chosen as a ... |