SSGCID
Seattle Structural Genomics Center for Infectious Disease

Cited Structures: list of articles citing SSGCID structures

We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.

This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.

Cited structures

Manually reviewed citations

# PDB Additional SSGCID structures cited Link Title Year Citation Highlighted abstract
1 4ix8 - http://www.sciencedirect.com/science/article/pii/S2211320714000128 Tyrosine aminotransferase from< i> Leishmania infantum</i>: A new drug target candidate 2014 MA Moreno, A Alonso, PJ Alcolea, A Abramov - International Journal for , 2014 - Elsevier ... code: 3DYD) and the mouse TAT (PDB code: 3PDX) ( Mehere et al., 2010). Recently, the structure of LiTAT has been solved to 2.3 (PDB code: 4IX8) ( Moreno et al., 2014). On the basis of this background, the aim of the work is ...
2 3dmo 3mpz http://meriva.pucrs.br/dspace/handle/10923/5732 Análise bioquímica, estrutural e funcional da enzima citidina deaminase (EC 3.5. 4.5) de Mycobacterium tuberculosis H37Rv 2014 ZAS Quitian - 2014 - meriva.pucrs.br ... This work presents the crystal structures of MtCDA in complex with uridine (2.4 Å resolution) and ...process, showing that structural flexibility of some residues are important to product binding. ... MtCDAstructure. The role of the conserved glutamate-47 (E47) residue was ...
3 3gtd 3qbp, 3rrp http://www.teses.usp.br/teses/disponiveis/60/60136/tde-15052014-084203/publico/T... Structural and functional characterization of Trypanosoma cruzi fumarate hydratase isoforms 2014 RAP de Pdua - teses.usp.br ... TcFHs structural models, built by homology modeling using the Leishmania major fumarase crystalstructure as template, were compared to ... Keywords: fumarase, fumarate hydratase, Chagas disease,selective inhibitors, crystal structure. ... The fainter structures correspond to the ...
4 3nwo - http://www.sciencedirect.com/science/article/pii/S0014579314001033 The crystal structure of the amidohydrolase VinJ shows a unique hydrophobic tunnel for its interaction with polyketide substrates 2014 Y Shinohara, A Miyanaga, F Kudo, T Eguchi - FEBS letters, 2014 - Elsevier ... method using the Molrep program [16], with the crystal structure of the putative proline iminopeptidase Mycobacterium smegmatis (PDB code: 3NWO) being used ... The resulting coordinates and structure factors have been deposited in the Protein Data Bank (PDB code: 3WMR) ...
5 3gka - http://www.teses.usp.br/teses/disponiveis/76/76132/tde-24032014-151614/en.php Estudo estrutural das enzimas Topoisomerase II Mitocondrial e Old Yellow Enzyme de Trypanosoma cruzi 2014 NC Rodrigues - teses.usp.br ... resolution of 1.27 and 2.00 , respectively. The atomic coordinates and structure factors of the TcOYE structure in P212121 and P21 crystalline forms have been deposited in the Protein DataBank with the accession codes 4E2B and 4E2D, respectively. TcOYE displays a ...
6 3jvh 3u04, 3ke1, 3k14, 3ikf http://pubs.acs.org/doi/abs/10.1021/ci5004152 Toward On-The-Fly Quantum Mechanical/Molecular Mechanical (QM/MM) Docking: Development and Benchmark of a Scoring Function 2014 P Chaskar, V Zoete, UF Röhrig - Journal of chemical information …, 2014 - ACS Publications ... Quality of the structure: resolution <2.5 Å, DPI <0.5 Å, ligand without missing atoms and ... of theligands, we extracted the respective coordinates from the Protein Databank (PDB) file, added ...Protonation states were determined based on pK a values and structural data for some ...
7 4k73 - http://www.theses.fr/2014PA066415 Stratégies d'optimisation des bêta-lactamines pour le traitement des infections dues aux mycobactéries multirésistantes 2014 V Dubée - 2014 - theses.fr ... 20 Tableau 3. Structures de L,D-transpeptidases inscrites dans la Protein Data Bank. ... Figure 1.Structure des classes les plus fréquemment utilisées de β-lactamines. ... accepteur. La pénicillineest un analogue structural de cette extrémité D-Ala–D-Ala, et pourrait donc former un ...
8 3lg6 - http://www.sciencedirect.com/science/article/pii/S0304416514003171 Molecular dynamics for computational proteomics of methylated histone H3 2014 C Grauffel, RH Stote, A Dejaegere - Biochimica et Biophysica Acta (BBA)- …, 2014 - Elsevier ... This analysis is made possible by the substantial amount of structural information available oncomplexes between PHD domains and modified histone tails. ... Protein Data Bank IDs are indicated,and NMR structures are labeled with a (*). Protein name, Ref. ... PDB structure. ...
9 3enk - http://etheses.whiterose.ac.uk/8424/ Structural and Functional Studies of the Light-Dependent Protochlorophyllide Oxidoreductase Enzyme 2014 D Armstrong - 2014 - etheses.whiterose.ac.uk ... the protein structure. POR isoforms in plants are also notable as components of the prolamellarbodies (PLBs), large paracrystalline structures that are precursors to the thylakoid ... similar structuralfeatures, leading to the production of a structural model for POR. A unique ...
10 4dhk 3km3 http://oaktrust.library.tamu.edu/handle/1969.1/152538 Functional Exploration and Characterization of the Deaminases of Cog0402 2014 DS Hitchcock - 2014 - oaktrust.library.tamu.edu ... Page 29. 18 4DHK). The catalytic machinery for both of these reactions remains intact. Substrate ...centered around residues aligning to the catalytic Glu138. However the structure shows 370AAs, whereas E. coli dCTP deaminase (PDB: 1XS1) is only 193 residues. A full ...