We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 7MI0 | 2021 | 0 |
| 7MIW | 2021 | 0 |
| 7MYQ | 2021 | 0 |
| 7MYS | 2021 | 0 |
| 7N1L | 2021 | 0 |
| 7T7J | 2022 | 0 |
| 7RCR | 2021 | 0 |
| 7RHE | 2021 | 0 |
| 7RZO | 2021 | 0 |
| 7S5E | 2021 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 5v6d | 4dut, 6ay1, 4ek2, 4hr2 | https://www.mdpi.com/1422-0067/21/18/6779 | Structure, Folding and Stability of Nucleoside Diphosphate Kinases | 2020 | F Georgescauld, Y Song, A Dautant- International Journal of Molecular, 2020 - mdpi.com | So far, 162 structures from 30 different species have been deposited within the Protein Data Bank ( PDB ) which fall to tetramer type II and two are isolated dimers [23,24,25] (Table 1). The structure of most tetramers was recently solved by a structural genomics approach yet ... 5v6d Neisseria gonorrhoeae in complex with citrate (1.85 Å) Abendroth, J.; Mayclin, S.J.; Lorimer, D.D.; Edwards, T.E. |
| 2 | 6bla | - | https://journals.plos.org/plospathogens/article?rev=2&id=10.1371/journal.ppat.10... | Recognition of a highly conserved glycoprotein B epitope by a bivalent antibody neutralizing HCMV at a post-attachment step | 2020 | X Ye, H Su, D Wrapp, DC Freed, F Li, Z Yuan- PLoS, 2020 - journals.plos.org | A 1.8 crystal structure of 325 Fab in complex with the peptide epitope revealed the molecular determinants of 325 binding to gB A molecular replacement solution was found in PHASER [67] by using a search ensemble generated from PDB IDs: 6BLA and 6DDM. |
| 3 | 6uk3 | 5v96, 6aph, 3d64, 3n58, 3glq | https://www.mdpi.com/2218-273X/10/12/1682 | S-adenosyl-l-homocysteine Hydrolase: A Structural Perspective on the Enzyme with Two Rossmann-Fold Domains | 2020 | K Brzezinski- Biomolecules, 2020 - mdpi.com | major [3G1U, unpublished], Cryptosporidium parvum [5HM8 unpublished], Acanthamoeba castellanii [ 6UK3 , unpublished], Naegleria Crystal structures of SAHases were acquired from PDB cofactor-binding domains was performed based on secondary structure assignments in |
| 4 | 3u0g | - | https://www.mdpi.com/2073-4344/10/9/1024 | Counterbalance of Stability and Activity Observed for Thermostable Transaminase from Thermobaculum terrenum in the Presence of Organic Solvents | 2020 | EY Bezsudnova, AY Nikolaeva, SY Kleymenov- Catalysts, 2020 - mdpi.com | the hydration shell and the interface of the enzyme molecules, thus defining the balance between the structural integrity and Somewhat counterintuitively, crystallographic studies of solvent-resistant enzymes did not reveal significant changes in structures obtained from crystals |
| 5 | 2lwk | - | https://deepblue.lib.umich.edu/handle/2027.42/155127 | Using Machine Learning to Better Predict the Structure of RNA and RNA Containing Complexes | 2020 | S Chhabra - 2020 - deepblue.lib.umich.edu | 53 3.5 Top 10 RNA Structures for 2LWK predicted from sequence using CS-Fold and Rosetta structures . The statistics from Protein Data Bank ( PDB ) (http://www.rcsb.org) current understanding of the RNA structure -function relationships is limited due to |
| 6 | 5vir | 4fry, 4ymi | https://pubs.acs.org/doi/abs/10.1021/acsinfecdis.0c00735 | Structural and Molecular Dynamics of Mycobacterium tuberculosis Malic Enzyme, a Potential Anti-TB Drug Target | 2020 | KH Burley, BJ Cuthbert, P Basu- ACS Infectious, 2020 - ACS Publications | \ Interestingly, the three top-scoring NADP+ molecules are found in structures of Mtb nicotinamide-mononucleotide adenylyltransferase (NadD) (PDB ID: 4S1O) and Mycobacterium abscessus NadD (PDB ID: 4YMI and 5VIR). These results |
| 7 | 4g7f | 4lsm, 4fzi, 4iv5 | https://link.springer.com/content/pdf/10.1007/s10863-020-09834-8.pdf | Synthesis of new N,S-acetal analogs derived from juglone with cytotoxic activity against Trypanossoma cruzi | 2020 | PAF Pacheco, T de Menezes Ribeiro- Journal of Bioenergetics, 2020 - Springer | Naphthoquinones are considered important structures in medicinal chemistry due to their synthetic versatility and their v.1.0.1 program was used to build the molec- ular structure of ligands the best SI value among all molecules tested indicating that this structural feature might |
| 8 | 4x54 | - | https://onlinelibrary.wiley.com/doi/abs/10.1111/mmi.14437 | The mycolic acid reductase Rv2509 has distinct structural motifs and is essential for growth in slowgrowing mycobacteria | 2020 | A Javid, C Cooper, A Singh, S Schindler- Molecular, 2020 - Wiley Online Library | structures of the four highest-scoring experimental SDRs (3ASU/3ASV, 1XG5, 4X54 and 4BMV based on the SDR from Sphingobium yanoikuyae (4BMV. pdb ; GenBank ID ACB78183.1 structure elements of Rv2509 aligned to its corynebacterial homologues, the core structure of |
| 9 | 5i1f | 5j49, 5vct, 5ve7 | https://www.frontiersin.org/articles/10.3389/fmicb.2020.01596/full?report=reader | In vitro and in vivo Evaluation of in silico Predicted Pneumococcal UDPG: PP Inhibitors | 2020 | F Cools, D Triki, N Geerts, P Delputte- Frontiers in, 2020 - frontiersin.org | Currently, the crystal structure of UDPG:PP is only known for several eukaryotes and following bacteria: Helicobacter pylori ( PDB codes 3JUJ and 3JUK) (Kim et al., 2010), E. coli ( PDB code 2E3D) (Thoden and Holden ( PDB codes 5VCT, 5VE7, 5J49, 5I1F ) (Abendroth et al |
| 10 | 5b8i | - | https://www.sciencedirect.com/science/article/pii/S1570963919300445 | Fungal Lanosterol 14-demethylase: A target for next-generation antifungal design | 2020 | BC Monk, AA Sagatova, P Hosseini, YN Ruma- et Biophysica Acta (BBA, 2020 - Elsevier | cerevisiae LDM as a template ( PDB 4LXJ), suggested that crystal structure of the catalytic domain of human CYP51 ( PDB calcineurinB in complex with FK506 ( 5B8I ); S. cerevisiae Elf2 |