We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 3R9Q | 2011 | 0 |
| 7STZ | 2022 | 0 |
| 3QYR | 2011 | 0 |
| 7SSR | 2023 | 0 |
| 3PZY | 2011 | 0 |
| 7SSQ | 2023 | 0 |
| 3P2Y | 2010 | 0 |
| 7SL5 | 2022 | 0 |
| 3OA3 | 2010 | 0 |
| 3O0K | 2010 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 2kok | - | http://link.springer.com/article/10.1007/s10142-012-0296-x | A new arsenate reductase involved in arsenic detoxification in Anabaena sp. PCC7120 | 2013 | S Pandey, AK Shrivastava, VK Singh, R Rai… - Functional & integrative …, 2013 - Springer | ... b Structure-based multiple sequence alignment of All0195 homologs. ... 261278552 |
| 2 | 3t7c | 3s55 | https://www.biorxiv.org/content/10.1101/2020.10.15.341941v1.abstract | Structural studies on M. tuberculosis decaprenyl phosphoryl--D-ribose epimerase-2 enzyme involved in cell wall biogenesis | 2020 | SP Gangwar, A Bandyopadhyay, AK Saxena- bioRxiv, 2020 - biorxiv.org | The MtbDprE2 structure was aligned with structures of PDB database using TM- structural alignment program of I-TASSER server, which yielded ten closest structural homologs (as coverage=97.2% [54] (vi) PDB - 3t7c , identity=13.3%, coverage=97.2% [55] (vii) PDB -1ipe |
| 3 | 2kn9 | - | http://journal.iisc.ernet.in/index.php/iisc/article/view/4461 | Redox Proteins of Mycobacterium tuberculosis | 2014 | S Phulera, M Akif, AA Sardesai? - Journal of the Indian Institute of Science, 2014 - journal.iisc.ernet.in | ... The individual structures shown are (A) NrdH, pdb id: 4HS1, (B) FurB, pdb id: 2O03, (C) DipZ,pdb id: 2HYX, (D) FcoT, pdb id: 2PFC, (E) AhpD, pdb id: 1KNC, (F) Mycoredoxin, pdb id: 2LQQ, (G) Rubedoxin C with Zinc atom shown as sphere, pdb id: 2KN9, (H) TrxC, pdb id: 1LU4 ... |
| 4 | 3k31 | - | http://link.springer.com/article/10.1007/s12154-015-0135-3 | Prediction of protein targets of kinetin using in silico and in vitro methods: a case study on spinach seed germination mechanism | 2015 | SP Kumar, VR Parmar, YT Jasrai… - Journal of Chemical …, 2015 - Springer | ... 3 Enoyl-(acyl-carrier protein) reductase Anaplasma phagocytophilum (strain HZ) 3K31 0.25 0.39 ...similarity methods prioritized probable protein targets available from spinach PDB proteome. ...ligand similarity with caffeine, availability of yeast experi- mental structure complex with ... |
| 5 | 3v7o | 5dvw | https://www.intechopen.com/books/ebola/strategies-for-the-development-of-small-m... | Strategies for the Development of Small Molecule Inhibitors of Ebola Viral Infection | 2016 | S Pleko, Podlipnik - Ebola, 2016 - intechopen.com | ... 2. Structure and action of Ebola virus. ... PDB structures: 2i8b, 3v7o, 5dvw, Target basic patcharound LYS 180 to inhibit the activation of transcription. ... PDB structures: 3vne, 3vnf, 4d9o,4m0q, 4or8, 4u2x, Inhibition of VP24 binding to karyopherin. ... |
| 6 | 4gie | - | https://www.mdpi.com/1422-0067/20/23/5916 | Trypanocidal Mechanism of Action and in silico Studies of p-Coumaric Acid Derivatives | 2019 | SP Lopes, YP Castillo, ML Monteiro- International journal of, 2019 - mdpi.com | In this work, twelve compounds were prepared, maintaining the (E)-3-(4-hydroxyphenyl) acrylic acid structure and modifying only the radical R for 7, C-8, C-9), being six from the aromatic ring and three from the side chain with the presence of carbonyl that confirms the structures |
| 7 | 3ijp | 4ywj, 4f3y | https://www.sciencedirect.com/science/article/pii/S0006291X18316516 | 4-Hydroxy-tetrahydrodipicolinate reductase from Neisseria gonorrhoeae structure and interactions with coenzymes and substrate analog | 2018 | S Pote, SE Pye, TE Sheahan- Biochemical and, 2018 - Elsevier | In case of NgDapB, the position of the coenzyme is modeled using structure of PaDapB ( PDB ID from Bartonella henselae, Burkholderia thailandensis, Escherichia coli, Pseudomonas aeruginosa, Staphylococcus aureus and Thermotoga maritima ( PDB IDs: 3IJP , 4F3Y, 1ARZ, 4YWJ, 3QY9, 1VM6). |
| 8 | 3ijp | - | https://www.sciencedirect.com/science/article/pii/S0304416520302610 | Comparative structural and mechanistic studies of 4-hydroxy-tetrahydrodipicolinate reductases from Mycobacterium tuberculosis and Vibrio vulnificus | 2021 | S Pote, S Kachhap, NJ Mank, L Daneshian- et Biophysica Acta (BBA, 2021 - Elsevier | This paper focuses on structural and mechanistic studies of DapB The structure for DapB has been determined from various bacterial species including Escherichia coli [14], Bartonella henselae [15 Fig. 2. (A) Tetrameric assembly of DapB from V. vulnificus ( PDB ID: 5TEN) |
| 9 | 3o2e | - | http://onlinelibrary.wiley.com/doi/10.1111/mmi.12649/full | Morphogenes bolA and mreB mediate the photoregulation of cellular morphology during complementary chromatic acclimation in Fremyella diplosiphon | 2014 | SP Singh, BL Montgomery - Molecular microbiology, 2014 - Wiley Online Library | ... Hypo, gene encodes hypothetical protein. C. Putative structure of F. diplosiphon BolA (in green) modelled on the Babesia bovis BolA structure (in red, PDB:3O2E; Abendroth et al., 2011) using two independent protein structure prediction servers, ie I-TASSER and PHYRE. ... |
| 10 | 2kwl | 2lky, 2lol | http://repositoriodigital.uns.edu.ar/handle/123456789/2489 | Aspectos estructurales y dinmicos en la relajacin de sistemas complejos, con nfasis en agua lquida, sobreenfriada y nanoconfinada | 2015 | SR Accordino - 2015 - repositoriodigital.uns.edu.ar | prctico: previene la agregacin de dos placas de grafeno. Page 9. 9 Abstract In this Thesis we studied, by means of molecular dynamic simulations, the structural and We also determined the geometrical quality of the local structure of these kinds of molecules. In |