We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 8CTR | 2022 | 0 |
| 8CU5 | 2022 | 0 |
| 8CU9 | 2022 | 0 |
| 4O8K | 2014 | 0 |
| 7U5Q | 2022 | 0 |
| 7U5F | 2022 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 4pfz | 3rr6, 3qdf | https://www.sciencedirect.com/science/article/pii/S0006291X18328705 | Structural and functional analysis of a dimeric fumarylacetoacetate hydrolase (EaFAH) from psychrophilic Exiguobacterium antarcticum | 2019 | W Yoo, CW Lee, B Kim, LTHL Le, SH Park- Biochemical and, 2019 - Elsevier | overall monomer structure , a schematic diagram of the connectivity, and the residue numbering of each secondary structure are shown in ID:3RR6, Z score: 34.6), a 5-carboxymethyl-2- hydroxymuconate delta-isomerase from Mycobacterium smegmatis ( PDB ID: 4PFZ ; Z score |
| 2 | 3dah | - | https://bmcstructbiol.biomedcentral.com/articles/10.1186/s12900-019-0100-4 | Crystal structure of E. coli PRPP synthetase | 2019 | W Zhou, A Tsai, DA Dattmore- Structural, 2019 - bmcstructbiol.biomedcentral.com | Overall, this study details key structural features of an enzyme that catalyzes a critical step in nucleotide metabolism The structure was solved by molecular replacement using the PRPP synthetase from Burkholderia pseudomallei ( PDB 3DAH ) as the search model [14] |
| 3 | 3kre | - | http://scripts.iucr.org/cgi-bin/paper?fw5260 | Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of SAICAR synthase from Streptococcus suis serotype 2 | 2010 | X Cheng, G Lu, J Qi, H Cheng, F Gao? - Acta Crystallographica Section F Structural Biology and Crystallization Communications, 2010 - scripts.iucr.org | ... F62, 335-339.] ), Ehrlichia chaffeensis (PDB code 3kre ; Seattle Structural Genomics Center for Infectious Disease, unpublished work) and Pyrococcus horikoshii OT3 (Manjunath et al., 2010 [Manjunath, K., Jeyakanthan, J., Nakagawa, N., Shinkai, A., Yoshimura, M., Kuramitsu, S ... |
| 4 | 3nf4 | 3pfd | http://scripts.iucr.org/cgi-bin/paper_yard?fw5406 | Crystallization and preliminary structural analysis of dibenzothiophene monooxygenase (DszC) from Rhodococcus erythropolis | 2013 | X Duan, L Zhang, D Zhou, K Ji, T Ma? - Acta Crystallographica Section F Structural Biology and Crystallization Communications, 2013 - scripts.iucr.org | ... different protein structures with the highest protein-sequence similarity to DszC [PDB entries 2vig ... 277, 12200-12207.] ), 3nf4 (24% identity; Seattle Structural Genomics Center for Infectious Disease ... and structure factors have been deposited in the Protein Data Bank (Bernstein et ... |
| 5 | 6nb6 | - | https://www.nature.com/articles/s41467-020-17371-6 | Cryo-EM analysis of the post-fusion structure of the SARS-CoV spike glycoprotein | 2020 | X Fan, D Cao, L Kong, X Zhang- Nature communications, 2020 - nature.com | However, structural information of the post-fusion S2 from these highly pathogenic human-infecting The structures of pre- and post-fusion SARS-CoV S glycoprotein dramatically differ This structure suggests potential targets for the development of vaccines and therapies against |
| 6 | 4i1v | 4i1u | http://www.sciencedirect.com/science/article/pii/S1047847714002172 | Crystal structure of Legionella pneumophila dephospho-CoA kinase reveals a non-canonical conformation of P-loop | 2014 | X Gong, X Chen, D Yu, N Zhang, Z Zhu, L Niu… - Journal of structural …, 2014 - Elsevier | ... The first DPCK crystal structure was solved and reported from Haemophilus influenzae (HiDPCK,PDB code 1jjv ( Obmolova et al ... DPCK structures are also available in the PDB, such asBurkholderia vietnamiensis DPCK (BvDPCK, PDB codes 4i1u, 4i1v, Seattle Structural ... |
| 7 | 4lc3 | - | https://royalsocietypublishing.org/doi/abs/10.1098/rsob.170248 | Structural and functional studies of Spr1654: an essential aminotransferase in teichoic acid biosynthesis in Streptococcus pneumoniae | 2018 | X Han, R Sun, T Sandalova, A Achour- Open biology, 2018 - royalsocietypublishing.org | The crystal structures of Spr1654 and in complex with PLP and PMP can direct the future rational design of novel therapeutic compounds against S. pneumoniae... The crystal structures were determined by molecular replacement in Phaser [40] using the crystal structure of UDP-4-amino-4-deoxy-l-arabinose-oxoglutarate aminotransferase from Burkholderia cenocepacia (PDB code: 4LC3) as search model. |
| 8 | 6nb3 | - | https://pubs.acs.org/doi/abs/10.1021/acsmedchemlett.1c00263 | Discovery of Small Molecule Entry Inhibitors Targeting the Fusion Peptide of SARS-CoV-2 Spike Protein | 2021 | X Hu, CZ Chen, M Xu, Z Hu, H Guo, Z Itkin- ACS Medicinal, 2021 - ACS Publications | SARS-CoV-2 entry into host cells relies on the spike (S) protein binding to the human ACE2 receptor. In this study, we investigated the structural dynamics of the viral S protein at the fusion pept... Comparison of the FP binding pocket of the spike protein of SARS-CoV-2 (PDB 6XR8), SARS-CoV-1 (PDB 5WRG), and MERS (PDB 6NB3). The spike protein is rendered in ribbons with the FP colored in magenta and the HR1 domain in blue. |
| 9 | 6vxx | - | https://www.nature.com/articles/s41392-020-00392-4 | Bimodular effects of D614G mutation on the spike glycoprotein of SARS-CoV-2 enhance protein processing, membrane fusion, and viral infectivity | 2020 | X Jiang, Z Zhang, C Wang, H Ren, L Gao- Signal transduction and, 2020 - nature.com | structure of S glycoprotein, we performed three-dimensional (3D) modeling with the template of published SARS-CoV-2 S structure ( 6vxx . pdb ) by the idea that the D614G mutation may affect the stability of the S protein trimer as suggested above based on structural analysis (Fig |
| 10 | 3hhe | 3uw1 | https://www.sciencedirect.com/science/article/pii/S0141022920300971 | Biochemical and structural insights into an Ochrobactrum sp. CSL1 ribose-5-phosphate isomerase A and its roles in isomerization of rare sugars | 2020 | X Ju, X Xu, M Shen, X Mo, H Fan, L Liangzhi- Enzyme and Microbial, 2020 - Elsevier | thermophilus (TtRpiA, 1UJ5), Burkholderia thailandensis (BtRpiA, 3UW1), Bartonella henselae (BhRpiA, 3HHE ) and E. coli (EcRpiA, 1O8B) with ligand-binding structures in PDB , the sequence Homology modeling is an option to investigate the structure -activity relationship of |