We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 7TY0 | 2022 | 0 |
| 7TXZ | 2022 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 4pq9 | - | http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4606783/ | Crystal structural basis for Rv0315, an immunostimulatory antigen and inactive beta-1, 3-glucanase of Mycobacterium tuberculosis | 2015 | W Dong, J Huang, Y Li, Y Tan, Z Shen, Y Song - Scientific , 2015 - ncbi.nlm.nih.gov | ... was solved at a resolution of 1.7 by molecular replacement using the structure of-1,3-glucanase from Mycobacterium marinum (PDB code 4PQ9) as a ... Other than the differentsize of the cavity, the overall structure of Rv0315 was similar to that of ZgLamA GH16 (Fig. ... |
| 2 | 6bfu | - | https://www.nature.com/articles/s41467-024-49693-0 | Neutralizing antibodies reveal cryptic vulnerabilities and interdomain crosstalk in the porcine deltacoronavirus spike protein | 2024 | W Du, O Debski-Antoniak, D Drabek- Nature, 2024 - nature.com | the antigenic structure of the PDCoV S protein. Through functional and structural characterization The PDB file of PDCoV spike protein ( PDB ID: 6BFU ) and SARS-CoV-2 spike protein ( |
| 3 | 6q06 | - | https://journals.plos.org/plospathogens/article?id=10.1371/journal.ppat.1008943 | Convergent structural features of respiratory syncytial virus neutralizing antibodies and plasticity of the site V epitope on prefusion F | 2020 | W Harshbarger, S Tian, N Wahome, A Balsaraf- PLoS, 2020 - journals.plos.org | ]To fully elucidate the RSB1 paratope and the targeted PreF epitope architecture and better understand the competition with multiple antigenic sites, we determined the crystal structure of the ... Surface potential around PreF residue Asn200 from the structure of RSV B PreF PDB 6Q06 (left), with the RSB1 interacting residue Arg53(LCDR2) is shown again for comparison |
| 4 | 4qtp | - | https://www.biorxiv.org/content/10.1101/674879v1.abstract | SiaABCDA threonine phosphorylation pathway that controls biofilm formation in Pseudomonas aeruginosa | 2019 | WH Poh, J Lin, B Colley, N Mller, BC Goh- BioRxiv, 2019 - biorxiv.org | 7NTU Institute of Structural Biology, Nanyang Technological University, Singapore 18 Biofilms are ubiquitous, multicellular structures embedded in a self-made matrix, that can suspended biofilms greatly influence the development, structure and function of their surface-attached |
| 5 | 4qtp | - | https://www.biorxiv.org/content/10.1101/674879v3.abstract | The SiaABC threonine phosphorylation pathway controls biofilm formation in response to carbon availability in Pseudomonas aeruginosa | 2020 | WH Poh, J Lin, B Colley, N Mller, BC Goh- BioRxiv, 2020 - biorxiv.org | SiaC crystal 319 structure , and an anti-sigma factor antagonist from Mycobacterium paratuberculosis ( PDB ID: 320 4QTP ; gene ID MAP_0380; Fig 6D) was identified as the closest homologue (Z score of 9.0, an 321 amino-acid sequence |
| 6 | 6tz8 | - | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7669531/ | Current Challenges and Opportunities in Designing ProteinProtein Interaction Targeted Drugs | 2020 | WH Shin, K Kumazawa, K Imai- and Applications in, 2020 - ncbi.nlm.nih.gov | Phase Reached*, Modality*, Drug PDB ID**, Drug-Protein PDB ID*, Target PPI PDB ID binding protein 1A inhibitor, Inhibitor, Approved (1994), Small molecule, FK5, 1BKF, 6TZ8 (FKBP12/CNA 2.8 resolution by cryo-electron microscopy (cryo-EM).65 The cryo-EM structure revealed ... 6TZ8 (FKBP12/CNA/CNB) (C. neoformans) |
| 7 | 3ecd | 3h7f | http://www.biomedcentral.com/1472-6750/14/93 | A novel serine hydroxymethyltransferase from Arthrobacter nicotianae: characterization and improving catalytic efficiency by rational design | 2014 | W Jiang, L Chen, S Yuan, B Li, Z Liu - BMC biotechnology, 2014 - biomedcentral.com | ... directed mutagenesis was indicated on the three-dimensional structure of AnSHMT, which wasconstructed from the known x-ray structure of Burkholderia Pseudomallei MycobacteriumTuberculosis T.Th.Hb8 (PDB entry 3H7F, 2DKJ and 3ECD) using Swiss ... |
| 8 | 6nae | - | https://www.preprints.org/manuscript/202003.0183 | Two Achilles' Heels of the Ebolavirus Glycoprotein? | 2020 | W Li - 2020 - preprints.org | in complex with a broadly neutralizing human antibody, adi-15946 31 6NAE Crystal Structure Structure of ZEBOV GP in complex with 3T0265 antibody 36 6S8J Structure of ZEBOV 1. Experimentally determined Ebolavirus GP structures inside Protein Data Bank ( PDB [128]) as |
| 9 | 6bfu | - | https://academic.oup.com/ve/article-abstract/6/1/veaa003/5734706 | Unraveling virus relationships by structure-based phylogenetic classification | 2020 | WM Ng, AJ Stelfox, TA Bowden- Virus Evolution, 2020 - academic.oup.com | Unraveling virus relationships by structure -based phylogenetic classification. Weng M Ng. Division of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford. ... human coronavirus NL63 (3KBH); human coronavirus 229E (6ATK); porcine deltacoronavirus, PDCoV (6BFU). All chains not comprising S1-CTD (e.g. receptor and antibody fragments) were removed prior to structural alignment |
| 10 | 3nfw | - | http://scripts.iucr.org/cgi-bin/paper?dp5021 | Crystallization and preliminary X-ray analysis of the reductase component of p-hydroxyphenylacetate 3-hydroxylase from Acinetobacter baumannii | 2012 | W Oonanant, J Sucharitakul, P Chaiyen? - Acta Crystallographica Section F Structural Biology and Crystallization Communications, 2012 - scripts.iucr.org | ... All of these structures share the same protein fold and lack the extra C-terminal domain found in C 1 . Recently, the structure of NTA monooxygenase component B from Mycobacterium thermoresistibile (PDB entry 3nfw ; Zhang et al., 2011 [Zhang, Y., Edwards, TE, Begley, DW ... |