We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 6Q04 | 2020 | 36 |
| 6NB7 | 2019 | 34 |
| 7K45 | 2020 | 32 |
| 2LWK | 2012 | 31 |
| 7N8H | 2021 | 28 |
| 7JZL | 2020 | 28 |
| 7JVC | 2021 | 27 |
| 6BFU | 2017 | 26 |
| 3LAA | 2010 | 26 |
| 7LXY | 2021 | 26 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3ifg | - | http://dx.plos.org/10.1371/journal.pone.0009280 | The X-ray crystal structure of Escherichia coli succinic semialdehyde dehydrogenase; structural insights into NADP+/enzyme interactions | 2010 | CG Langendorf, TLG Key, G Fenalti, WT Kan? - PloS one, 2010 - dx.plos.org | ... Shortly after the human SSADH structure was published, the structure of SSADH from Burkholderia pseudomallei, without a substrate or cofactor (PDB ID: 3ifg and 3ifh), was deposited into the PDB by the Seattle Structural Genomic Centre for Infectious Disease. ... |
| 2 | 3d5t | 3doc | http://www.sciencedirect.com/science/article/pii/S0301462210002437 | 'Cold spots' in protein cold adaptation: Insights from normalized atomic displacement parameters (< i> B'</i>-factors) | 2010 | A Siglioccolo, R Gerace, S Pascarella - Biophysical chemistry, 2010 - Elsevier | ... Growth temperature of the microorganism sources of the selected proteins were taken from thedatabank DSMZ (http://www.dsmz.de/, Deutsche Sammlung von ... Family, Source a, Growth T (?C) b, Pdb ID c, Res. ... Burkholderia pseudomallei, 40, 3D5T, 2.51, 253/328 (77%), 2, 331. ... |
| 3 | 3ecd | 3h7f | http://www.sciencedirect.com/science/article/pii/S0141813009002098 | Structural adaptation of serine hydroxymethyltransferase to low temperatures | 2010 | A Siglioccolo, F Bossa, S Pascarella - International journal of biological Macromolecules, 2010 - Elsevier | ... Table 5. List of representative structures of SHMT currently available in the Protein Data Bank. PDB id Resolution (Å) Biological source 3ECD 1.60 Burkholderia pseudomallei. ... |
| 4 | 3cez | - | http://scholar.google.com/https://etd.ohiolink.edu/!etd.send_file?accession=wrig... | Understanding the Molecular Dynamics of YPEL3 and FHIT Gene Expression | 2010 | KD KELLEY - 2010 - etd.ohiolink.edu | ... protein structure may also aid in understanding the molecular events involved in theinduction and maintenance of premature senescence. Identifying structural homologybetween a predicted model of YPEL3 and other known structures may ... |
| 5 | 3cez | 3cxk, 3eoo | http://www.jbc.org/content/285/43/33315.short | Insights into function, catalytic mechanism, and fold evolution of selenoprotein methionine sulfoxide reductase B1 through structural analysis | 2010 | FL Aachmann, LS Sal, HY Kim, SM Marino? - Journal of Biological Chemistry, 2010 - ASBMB | ... Relative to MsrB1, the crystal structures of MsrBs from N. gonorhoeae (PDB code 1L1D) (8), X. campestris (PDB code 3HCI) (36), B. pseudomallei (PDB code 3CEZ/3CXK), S. pneumoniae (PDB code 3E0M) (31), and B. subtilis (3E0O) (31), as well as the solution structure of B ... |
| 6 | 3kre | - | http://scripts.iucr.org/cgi-bin/paper?fw5260 | Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of SAICAR synthase from Streptococcus suis serotype 2 | 2010 | X Cheng, G Lu, J Qi, H Cheng, F Gao? - Acta Crystallographica Section F Structural Biology and Crystallization Communications, 2010 - scripts.iucr.org | ... F62, 335-339.] ), Ehrlichia chaffeensis (PDB code 3kre ; Seattle Structural Genomics Center for Infectious Disease, unpublished work) and Pyrococcus horikoshii OT3 (Manjunath et al., 2010 [Manjunath, K., Jeyakanthan, J., Nakagawa, N., Shinkai, A., Yoshimura, M., Kuramitsu, S ... |
| 7 | 3gp5 | - | http://www.jbc.org/content/285/27/21049.short | Structure and Activity of the Metal-independent Fructose-1, 6-bisphosphatase YK23 from Saccharomyces cerevisiae | 2010 | E Kuznetsova, L Xu, A Singer, G Brown, A Dong? - Journal of Biological Chemistry, 2010 - ASBMB | ... of YK23 was solved to 1.75-? resolution using selenomethionine-substituted protein and multiple wavelength anomalous dispersion (PDB code 3F3K ... 2a6p; Z-score 23.7; rms deviation 1.9 ?), the phosphoglyceromutase GpmA from Burkholderia pseudomallei (3gp5; Z-score ... |
| 8 | 3d6b | 3ii9, 3i3r, 3kjr | https://www.annualreviews.org/doi/abs/10.1146/annurev.biophys.050708.133630 | Protein crystallization using microfluidic technologies based on valves, droplets, and SlipChip | 2010 | L Li, RF Ismagilov- Annual review of biophysics, 2010 - annualreviews.org | was compared with current state-of-the-art technologies at the Seattle Structural Genomics Center crystal structures were solved at higher resolutions higher than those for structures solved at at 1.73 (PDBid:3II9) compared to 2.2 at SSGCID (PDBid: 3D6B ), and dihydrofolate |
| 9 | 3k9w | - | http://www.sciencedirect.com/science/article/pii/S0022283610009502 | Kinetic, Thermodynamic, and Structural Insight into the Mechanism of Phosphopantetheine Adenylyltransferase from< i> Mycobacterium tuberculosis</i> | 2010 | TJ Wubben, AD Mesecar - Journal of molecular biology, 2010 - Elsevier | ... 21 Enteroccoccus faecalis, 22 and Helicobacter pylori; 23 and Staphylococcus aureus in complex with 3'-phosphoadenosine 5'-phosphosulfate, 24 Burkholderia pseudomallei in complex with hydrolyzed dPCoA [Protein Data Bank (PDB) ID 3K9W; unpublished], and ... |
| 10 | 3dmo | - | http://www.sciencedirect.com/science/article/pii/S1047847709003463 | Structural and functional analyses of< i> Mycobacterium tuberculosis Rv3315c</i>-encoded metal-dependent homotetrameric cytidine deaminase | 2010 | ZA S?nchez-Quitian, CZ Schneider, RG Ducati? - Journal of structural Biology, 2010 - Elsevier | ... in the PDB (3IJF). Fig. 7A and B show two views of the canonical homotetrameric structure observed for CDAs from S. cerevisiae (1R5T), B. subtilis (1UX1, 1UWZ, 1UX0, 1JTK), Mus musculus (1ZAB, 2FR5, 2FR6), Bacillus anthracis (2D30), Burkholderia pseudomallei (3DMO), ... |