We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 4ZJU | 2015 | 13 |
| 3O0M | 2010 | 13 |
| 3SBX | 2011 | 13 |
| 4O3V | 2014 | 13 |
| 3CEZ | 2008 | 13 |
| 3GVG | 2009 | 13 |
| 3KRS | 2009 | 13 |
| 7RA8 | 2021 | 13 |
| 3I4E | 2009 | 13 |
| 3FVB | 2009 | 13 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3gvg | - | http://scripts.iucr.org/cgi-bin/paper?hv5201 | Structural and functional characterization of Mycobacterium tuberculosis triosephosphate isomerase | 2011 | SE Connor, GC Capodagli, MK Deaton? - Acta Crystallographica Section D Biological Crystallography, 2011 - scripts.iucr.org | ... Anal. Biochem. 182, 319-326.] ). Initial crystallization conditions for MtTPI were obtained from the MtTPI-GOL structure deposited in the RCSB (PDB entry 3gvg ; Seattle Structural Genomics Center for Infectious Disease, unpublished work). ... |
| 2 | 3ijp | - | http://ijib.classicrus.com/trns/81191318189978.pdf | Molecular cloning, biochemical and biophysical studies of Dihydrodipicolinate reductase of Pseudomonas aeruginosa PAO1 | 2011 | V Anand, A Gautam, D Sareen, TP Singh? - Int. J. Integ. Biol, 2011 - ijib.classicrus.com | ... Thermotoga maritima (Pearce et al., 2008) have been characterized both mechanistically and structurally while some preliminary crystallization reports have been published for Staphylococcus aureus (Dommaraju et al., 2010) and Bartonella henselae (PDB code 3IJP) as well. ... |
| 3 | 3eon | - | http://pubs.acs.org/doi/pdf/10.1021/cr900368a | Update 1 of: Proteases universally recognize beta strands in their active sites | 2011 | PK Madala, JDA Tyndall, T Nall, DP Fairlie - Chemical Reviews, 2011 - ACS Publications | ... All endoprotease complexes deposited in the Protein Data Bank (PDB http://www.rcsb.org/pdb mir- rored at http://oca.wehi.edu.au:8383/oca/22) through July 2009 were included in this study, updated with only a few key structures beyond that date. ... |
| 4 | 3enk | - | http://www.sciencedirect.com/science/article/pii/S0003269710007165 | Highly selective l-threonine 3-dehydrogenase from< i> Cupriavidus necator</i> and its use in determination of l-threonine | 2011 | T Ueatrongchit, Y Asano - Analytical Biochemistry, 2011 - Elsevier | ... BaGluE, UDP-glucose 4-epimerase from Bacillus anthracis (2C20); BpGluE, UDP-glucose 4-epimerase from Burkholderia pseudomallei (3ENK); SvDHT, DTDP-glucose 4,6-dehydratase from Streptomyces venezuelae (1R66); ... |
| 5 | 3gka | - | http://onlinelibrary.wiley.com/doi/10.1002/cctc.201100141/full | Stereopreferences of Old Yellow Enzymes: Structure correlations and sequence patterns in enoate reductases | 2011 | G Oberdorfer, G Steinkellner, C Stueckler? - ChemCatChem, 2011 - Wiley Online Library | ... Table 1. Protein structures used for comparison and cluster generation. Proteins, PDB accession code, Residues (Tyr/Phe/Ile) [a], Stereospecificity [b], Pseudo-atom distance [c] [?], Cluster. ... N-ethylmaleimide reductase, 3gka, Tyr?Tyr, R (ee=62 %)/S [e], 7.5, ... |
| 6 | 3ndn | - | http://digitalcommons.unl.edu/chemistrydiss/21/ | Purification of Lysine Decarboxylase: A Model System for PLP Enzyme Inhibitor Development and Study | 2011 | LC Zohner - 2011 - digitalcommons.unl.edu | ... This is inferred from the crystal structure of a bond phosphono-analogue of L-alanine (pdb 1BD0). ... contrast to 2.6 ?, for the aspartate oxygen-pyridine nitrogen in the crystal structure of ornithine decarboxylase from Lactobacillus (pdb ID 1ORD), hinting that hydrogen ... |
| 7 | 3k9w | - | http://scripts.iucr.org/cgi-bin/paper?gx5183 | Structure of Mycobacterium tuberculosis phosphopantetheine adenylyltransferase in complex with the feedback inhibitor CoA reveals only one active-site conformation | 2011 | T Wubben, AD Mesecar - Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 2011 - scripts.iucr.org | ... To date, a number of X-ray crystal structures of PPAT orthologs have been determined [PDB entries 1b6t (Izard & Geerlof, 1999 [Izard, T ... 404, 202-219.] ), 3k9w (Edwards et al., 2011 [Edwards, TE, Leibly, DJ, Bhandari, J., Statnekov, JB, Phan, I., Dieterich, SH, Abendroth, J., Staker ... |
| 8 | 3gvg | - | http://books.google.com/books?hl=en&lr=&id=TSsWBAAAQBAJ&oi=fnd&pg=PP1&dq=%223GVG... | How proteins work | 2011 | M Williamson - 2011 - books.google.com | ... in structure motifs 24 Membrane proteins are different from globular proteins 29 The structureofa protein is (more or less) determined by its sequence 31 Some proteins form metastablestructures 32 Structure is conserved more than sequence 33 Structural homology can be ... |
| 9 | 3fs2 | 3ez4, 3ijp | http://www.tandfonline.com/doi/full/10.3109/10611861003649753 | Targeting multiple targets in Pseudomonas aeruginosa PAO1 using flux balance analysis of a reconstructed genome-scale metabolic network | 2011 | D Perumal, A Samal, KR Sakharkar… - Journal of drug …, 2011 - Taylor & Francis | ... 3D structural information of target protein–ligand molecular complexes is a very usefulmethod to identify high-quality drug targets. ... A search against Protein Data Bank (PDB)helped us shortlist targets that had structure available. ... |
| 10 | 3men | - | http://pubs.acs.org/doi/abs/10.1021/bi101859k | Structure of Prokaryotic Polyamine Deacetylase Reveals Evolutionary Functional Relationships with Eukaryotic Histone Deacetylases | 2011 | PM Lombardi, HD Angell, DA Whittington, EF Flynn? - Biochemistry, 2011 - ACS Publications | The recently solved X-ray crystal structure of the Burkholderia pseudomallei APAH dimer (PDB ID: 3MEN; 34% sequence identity with M. ramosa APAH) contains a 16-residue L2 loop insertion (A79−R101) between helices B2 and B3. |