We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 3FDZ | 2009 | 13 |
| 3Q8H | 2011 | 13 |
| 4O3V | 2014 | 13 |
| 3CEZ | 2008 | 13 |
| 3L56 | 2010 | 13 |
| 3KRS | 2009 | 13 |
| 3KE1 | 2009 | 13 |
| 7RA8 | 2021 | 13 |
| 3FVB | 2009 | 13 |
| 4ZJU | 2015 | 13 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 2kwl | - | http://onlinelibrary.wiley.com/doi/10.1111/j.1365-2958.2011.07845.x/full | The coenzyme A disulphide reductase of Borrelia burgdorferi is important for rapid growth throughout the enzootic cycle and essential for infection of the mammalian host | 2011 | CH Eggers, MJ Caimano, RA Malizia? - Molecular Microbiology, 2011 - Wiley Online Library | ... The orientation is the same as Fig. 3 published in (Wallen et al., 2008). PDB code for the BaCoADR structure used is 3CGD. B. The predicted active site of BbCoADR. BbCoADR residues [Cys 42 (chain A) and Tyr366' and Tyr424' (chain B)] are indicated. ... |
| 2 | 3eon | - | http://pubs.acs.org/doi/pdf/10.1021/cr900368a | Update 1 of: Proteases universally recognize beta strands in their active sites | 2011 | PK Madala, JDA Tyndall, T Nall, DP Fairlie - Chemical Reviews, 2011 - ACS Publications | ... All endoprotease complexes deposited in the Protein Data Bank (PDB http://www.rcsb.org/pdb mir- rored at http://oca.wehi.edu.au:8383/oca/22) through July 2009 were included in this study, updated with only a few key structures beyond that date. ... |
| 3 | 3ftp | 3lls, 3grp | http://www.sciencedirect.com/science/article/pii/S1047847710003497 | Crystal structure of FabG4 from< i> Mycobacterium tuberculosis</i> reveals the importance of C-terminal residues in ketoreductase activity | 2011 | D Dutta, S Bhattacharyya, S Mukherjee, B Saha? - Journal of Structural Biology, 2011 - Elsevier | ... to 356 (loop II), and 395 to 417. Domain II is the catalytic domain and share highest sequence homology with Burkholderia Pseudomallei FabG (PDB: 3FTP, 42% in 248 residues overlap). The active site, deep-seated into the ... |
| 4 | 3dmo | 3mpz | http://www.sciencedirect.com/science/article/pii/S0003986111000464 | Crystal structure determination and dynamic studies of< i> Mycobacterium tuberculosis</i> Cytidine deaminase in complex with products | 2011 | ZA S?nchez-Quitian, LFSM Timmers? - Archives of Biochemistry and Biophysics, 2011 - Elsevier | ... Furthermore, in order to verify if these conformations are in agreement with CDA of different organism previously published, we analyzed other 13 CDA structures (PDB access codes: 3IJF, 3MPZ, 1MQ0, 3DMO, 1UX1, 2D30, 1UX0, 1UWZ, 1JTK, 2FR5, 1ZAB, 2FR6, and 3B8F) ... |
| 5 | 3fs2 | 3ez4, 3ijp | http://www.tandfonline.com/doi/full/10.3109/10611861003649753 | Targeting multiple targets in Pseudomonas aeruginosa PAO1 using flux balance analysis of a reconstructed genome-scale metabolic network | 2011 | D Perumal, A Samal, KR Sakharkar… - Journal of drug …, 2011 - Taylor & Francis | ... 3D structural information of target protein–ligand molecular complexes is a very usefulmethod to identify high-quality drug targets. ... A search against Protein Data Bank (PDB)helped us shortlist targets that had structure available. ... |
| 6 | 3gka | - | http://onlinelibrary.wiley.com/doi/10.1002/cctc.201100141/full | Stereopreferences of Old Yellow Enzymes: Structure correlations and sequence patterns in enoate reductases | 2011 | G Oberdorfer, G Steinkellner, C Stueckler? - ChemCatChem, 2011 - Wiley Online Library | ... Table 1. Protein structures used for comparison and cluster generation. Proteins, PDB accession code, Residues (Tyr/Phe/Ile) [a], Stereospecificity [b], Pseudo-atom distance [c] [?], Cluster. ... N-ethylmaleimide reductase, 3gka, Tyr?Tyr, R (ee=62 %)/S [e], 7.5, ... |
| 7 | 3emj | 3ld3, 3lo0, 3gvf, 3fq3 | http://www.doria.fi/handle/10024/69593 | The Structural Basis for inorganic Pyrophosphatase Catalysis and Regulation | 2011 | H Tuominen - 2011 - doria.fi | ... In addition, the PPase structures from five other species (Anaplasma phagocytophilum, Ehrlichia chaffeensis, Burkholderia pseudomallei, Brucella melitensis and Rickettsia prowazekii) (PDB ID: 3LD3, 3LO0, 3GVF, 3FQ3 and 3EMJ, respectively) obtained in the latest structural ... |
| 8 | 3k2h | 3nrr, 3kgb | http://informahealthcare.com/doi/abs/10.1517/13543776.2011.587804 | Antifolate agents: a patent review (2006-2010) | 2011 | DL Wright, AC Anderson - Expert opinion on therapeutic patents, 2011 - informahealthcare.com | ... Also reported for the first time in 2010 by the Seattle Structural Genomics Center for Infectious Disease is the structure of DHFR-TS from Babesia bovis bound to NADP, dUMP and pemetrexed (PDB ID: 3K2H) or raltitrexed (PDB ID: 3NRR). ... |
| 9 | 3dmo | - | http://permalink.lanl.gov/object/tr?what=info:lanl-repo/lareport/LA-UR-11-04078 | Achievements of structural genomics | 2011 | TC Terwilliger - 2011 - permalink.lanl.gov | ... Semi-automated Structure determination ~ ... PDB 3BV6, 2275 AA Metallo protein - ... l University ofIowa 2 University of Michigan Medical School Crystal structures of the FDTS-FAD- 3The JointCenter for Structural Genomics at GNF 4SSRL, Stanford University dUMP complex. ... |
| 10 | 3lg6 | - | http://www.sciencedirect.com/science/article/pii/S0006291X11009399 | Identification and clarification of the role of key active site residues in bacterial glutathione< i> S</i>-transferase zeta/maleylpyruvate isomerase | 2011 | T Fang, DF Li, NY Zhou - Biochemical and Biophysical Research Communications, 2011 - Elsevier | ... 2. Phylogenetic relationships of NagL (PDB ID, 2JL4) and other representative cGSTs from the protein data bank. ... delta (1V2A, 1R5A, 3F6F, 3EIN, 1PN9, 1JLV, 3F63 and lJLW), omega (1EEM), tau (2VO4, 1OYJ and 1GWC) and zeta (1FW1, 1E6B, 2JL4, 3NIV, 3LG6 and 2CZ2). ... |