We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 6V45 | 2019 | 0 |
| 6V77 | 2020 | 0 |
| 6V91 | 2020 | 0 |
| 6VH5 | 2020 | 0 |
| 6VS4 | 2020 | 0 |
| 6W15 | 2020 | 0 |
| 6W2O | 2020 | 0 |
| 6W6A | 2020 | 0 |
| 6W80 | 2020 | 0 |
| 6WBD | 2020 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 4ex5 | - | http://dx.plos.org/10.1371/journal.pone.0096198 | Structural Basis for the Site-Specific Incorporation of Lysine Derivatives into Proteins | 2014 | V Flgel, M Vrabel, S Schneider - PloS one, 2014 - dx.plos.org | ... A structure of the LysRS from Bacillus stearothermophilus (PDB code 3A74), Bulkholderia thailandensis (PDB code 4EX5 [38]) and Escherichia coli (PDB ... Atomic coordinates were submitted to the Protein Data Bank (http://www.ebi.ac.uk/pdbe/) with the PDB codes: 4CH6 ... |
| 2 | 3oxk | 3o0m, 3lb5, 3p0t, 3r6f | http://search.proquest.com/openview/a6bee6255f2ecb6acc21ab8e2dbd25bd/1?pq-origsi... | Structural Biology for Drug Design: Applications in Two Systems | 2016 | KM Maize - 2016 - search.proquest.com | ... Structurally, the purple HIT-like clade (4EGU, 3OXK) appears to be highly related to the known Hint proteins, whereas the remaining three HIT-like clades differ from the Hints by the addition of a long 12-15 residue C- terminal helix ... Sequence alignment alone fails to properly separate these two structural subclasses: those that draw the C-terminal helix from the same monomer (2EO4, 3LB5, 3P0T, 3O0M, 3NRD, 3OHE, 3I4S, and 3I24), and those that cross over to ... |
| 3 | 4mpq | - | https://ir.canterbury.ac.nz/handle/10092/13558 | Structural Characterisation of members of the DHDPS/NAL subfamily of proteins | 2017 | C MacDonald - 2017 - ir.canterbury.ac.nz | 2HMC A. tumefaciens HypD 4MPQ B. melitensis HypD p(r) Pair distribution function plot pdb Protein data base This information is displayed using espript software (Robert and Gouet 2014) with secondary structure of E. coli DHDPS being shown along the top |
| 4 | 3pgz | - | http://link.springer.com/protocol/10.1007/978-1-62703-032-8_2 | Structural Diversity Based on Variability in Quaternary Association. A Case Study Involving Eubacterial and Related SSBs | 2012 | SM Arif, M Vijayan - Single-Stranded DNA Binding Proteins, 2012 - Springer | ... structures reported in the literature and/or the coordinates of which have been deposited in the Protein Data Bank (PDB) ( 17 ) form ... in the PDB, but the results are yet to be published: 1. Thermus thermophilus (TtSSB) (PDB code 2cwa). 2. Bartonella henselae (BhSSB) (3pgz). ... |
| 5 | 3uam | - | http://122.252.232.85:8080/jspui/bitstream/123456789/16590/1/131812%2C131520.pdf | Structural Dynamics of Lytic PolysaccHaride Monooxygenase | 2017 | P Bharval, S Sarswati, RM Yennamalli - 2017 - 122.252.232.85 | (a) For AA9 the reference structure is 2bem, (b)For AA10 the reference structure is 2bem (c) For AA11 the reference structure is 4MAH PDB ID RMSD 2BEN 0.303 2LHS 1.273 2XWX 0.491 2YOW 0.445 2YOX 0.474 2YOY 0.440 3UAM 0.700 4A02 0.880 4ALC 0.673 |
| 6 | 4kzk | - | https://www.preprints.org/manuscript/201909.0313 | Structural Flexibility of Peripheral Loops and Extended C-Term Domain of Short Length Substrate Binding Protein from Rhodothermus marinus | 2019 | JE Bae, IJ Kim, Y Xu, KH Nam - 2019 - preprints.org | 120 analysis and substrate docking studies using previously reported crystal structure of SBP ( PDB 121 code 5Z6V) as starting point model structure Among them, 9 models ( PDB code: 123 2QH8, 3LFT, 5ER3, 6DSP, 5BRA, 3KSM, 2DRI, 5DTE, 4KZK , 4RS3, 8ABP) with |
| 7 | 4kzk | - | https://link.springer.com/article/10.1007/s10930-021-09970-z | Structural Flexibility of Peripheral Loops and Extended C-terminal Domain of Short Length Substrate Binding Protein from Rhodothermus marinus | 2021 | JE Bae, IJ Kim, Y Xu, KH Nam- The protein journal, 2021 - Springer | of RmSBP, we performed comparative analysis and substrate docking studies using a previously reported crystal structure of SBP ( PDB code 5Z6V) as the initial model structure Among them, 9 models ( PDB codes: 3LFT, 2QH8, 5ER3, 4RS3, 4KZK , 5BRA, 3KSM, 2DRI |
| 8 | 5ig2 | 3tjr | https://search.proquest.com/openview/6df7bf07391cd00cac2afea7f02e6375/1?pq-origs... | Structural Genomics of Infectious Agents | 2021 | JS Alenazi - 2021 - search.proquest.com | 4 1.3.5 Deposition of Structure in PDB ..... 4 identity to SDR from B.phymatum ( 5ig2 ) .... 45 S.3.2 Targeted approach of structure genomics can be applied to select the biologically important proteins |
| 9 | 3qhx | - | http://pubs.acs.org/doi/abs/10.1021/acs.jafc.7b02391 | Structural Insights into Substrate Specificity of Cystathionine -Synthase from Corynebacterium glutamicum | 2017 | HY Sagong, KJ Kim - Journal of agricultural and food chemistry, 2017 - ACS Publications | ... protein mass was 2.13 3 Da 1 with a solvent content of approximately 42.27%.(17) The structure of CgMetB was determined by molecular replacement with the CCP4 version of MOLREP,(18) with the structure of MetB from M. ulcerans ( PDB code 3QHX ) used as ... |
| 10 | 4h51 | 4w5k, 3meb | http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0158402 | Structural Insights into a Novel Class of Aspartate Aminotransferase from Corynebacterium glutamicum | 2016 | HF Son, KJ Kim - PloS one, 2016 - journals.plos.org | ... A) RMSD of reported AspAT structures were analyzed. PDB code 1SPA; Escherichia coli, 7AAT; Gallus gallus (cytosolic), 2CST; Gallus gallus (mitochondrial), 3PD6; Mus musculus, 4W5K; Trypanosoma brucei, 1AJR; Sus scrofa, 3MEB; Gaiardia lamblia, 1YAA; Saccharomyces cerevisiae, 4H51; Leishmania major, 3K7Y; Plasmodium falciparum, ... |