We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 7KI9 | 2021 | 0 |
| 5TEW | 2016 | 0 |
| 5UXW | 2018 | 0 |
| 2MZY | 2015 | 0 |
| 3R9Q | 2011 | 0 |
| 4Z0T | 2015 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 5upg | - | https://search.proquest.com/openview/c24741440c634a954b90086003c736d2/1?pq-origs... | Widening the Therapeutic Window: Time-Dependent Inhibitors of LpxC and InhA for Treating Multidrug-Resistant Bacterial Infections | 2018 | C Gu - 2018 - search.proquest.com | 46 Figure 2.10. X-ray crystal structure of paLpxC in complex with PF5081090 ( 5UPG . pdb ). ... 48 PD Pharmacodynamics PDB Protein Data Bank PIPES Piperazine-N,N-bis(2-ethanesulfonic acid) Sfp Phosphopantetheinyl transferase SKR Structure -kinetic relationship |
| 2 | 4v6h | - | http://scripts.iucr.org/cgi-bin/paper?dp5099 | X-ray crystal structure of a malonate-semialdehyde dehydrogenase from Pseudomonas sp. strain AAC | 2017 | M Wilding, C Scott, TS Peat, J Newman - Section F: Structural , 2017 - scripts.iucr.org | ... After solving the structure, the difficulties associated with the molecular replacement from thehighly homologous sequence models became clearer, as despite their homology the structuresvary significantly. ... Similarly, PDB entry 4v6h (Seattle Structural Genomics Center ... |
| 3 | 3mmt | - | http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0156105 | X-Ray Solution Scattering Study of Four Escherichia coli Enzymes Involved in Stationary-Phase Metabolism | 2016 | LA Dadinova, EV Shtykova, PV Konarev, EV Rodina - PloS one, 2016 - journals.plos.org | ... When comparing the predicted structure of FbaB to ten of the closest structural analogs in the PDB, three fructose bisphosphate aldolase homologues were identified (PDB: 1OK6, 3MMT, 3BV4) along with four tagatose bisphosphate aldolases ... |
| 4 | 3uam | - | http://core.kmi.open.ac.uk/download/pdf/11699007.pdf | X-ray structure and function studies of key enzymes for biomass conversion: GH6 cellobiohydrolases and GH61 lytic polysaccharide monooxygenases (LPMO) | 2013 | M Wu - 2013 - core.kmi.open.ac.uk | ... crassa Pch/P. chrysosporium Phanerochaete chrysosporium PDB Protein Data Bank PEG Polyethylene ... faecalis CBM33 (PDBcode 4A02)(Vaaje-Kolstad et al., 2012); PDB code 4ALC ... 4ALE, 4ALO, 4ALR, 4ALS, 4ALT) and Burkholderia pseudomallei CBM33 (PDBcode 3UAM). ... |
| 5 | 4ixo | - | http://scripts.iucr.org/cgi-bin/paper?kw5097 | X-ray structures of Nfs2, the plastidial cysteine desulfurase from Arabidopsis thaliana | 2014 | T Roret, H Pgeot, J Couturier, G Mulliert - Section F: Structural , 2014 - scripts.iucr.org | ... Group, PDB code, Organism, Sequence identity to AtNfs2 (%), UniProtKB accession No. Rmsd on C atoms, No. of equivalent residues to AtNfs2. ... 4eb7, 4hvk, 4ixo, Rickettsia africae, 20.7, C3PNQ7, 1.687, 218. 3a9x, Rattus norvegicus, 20.1, Q68FT9, 2.159, 263. 3a9y, 3aqz, ... |
| 6 | 3oks | - | https://link.springer.com/protocol/10.1007/978-1-4939-7366-8_4 | YASARA: A Tool to Obtain Structural Guidance in Biocatalytic Investigations | 2018 | H Land, MS Humble- Protein Engineering, 2018 - Springer | File > Load > yob file from Your working directory. File > Load > Pdb file from internet. To align the structures [31] 1.531. 386 g. 29.8. 3OKS h. 1.702. 717. 27.8 g Monomer. h Crystal structure (444 residues) of a 4-aminobutyrate transaminase from Mycobacterium smegmatis [34] |
| 7 | 5i4m | - | https://www.sciencedirect.com/science/article/pii/S0304389421000765 | Zn2+-dependent enhancement of Atrazine biodegradation by Klebsiella variicola FH-1 | 2021 | J Zhang, X Wu, X Zhang, H Pan, JES Shearer- Journal of Hazardous, 2021 - Elsevier | chloromuconate to generate maleylacetate (Cmara et al., 2008). As a major structural component in the cell wall, peptidoglycan plays important roles in cell growth. Studies have shown that three zinc-dependent endopeptidases |
| 8 | 3lnc | - | https://papers.ssrn.com/sol3/papers.cfm?abstract_id=4631842 | Zno-S. Cerevisiae: An Effective Growth Promoter of Astragalus Memeranaceus and Nano-Antibacterial Agent Against Fusarium Oxysporum by Improving Trifolirhizin | 2023 | Y Su, W Yang, R Wang, H Zhang, J Meng- Available at SSRN - papers.ssrn.com | 3D crystal structures were imported into , PDB ID: 3o7q was selected for MFS transporter, guanylate kinase based 607 on PDB ID: 3lnc , sedoheptulose-bisphosphatase based on PDB |
| 9 | 4whx | - | https://d-nb.info/1172351694/34 | ω-Transaminases as Promising Biocatalysts for the Chiral Synthesis of β-Amino Acids | 2018 | MSO Buss - thesis | The -Transaminase Engineering Database (oTAED): a navigation tool in protein sequence and structure space o Review about the protein stability engineering in silico tool FoldX ... The largest homologous family (HFam 11) includes 90% of all Fold type IV sequences and 23 annotated structures such as a branched-chain-amino-acid TA (PDB entry 4WHX) |