We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 4WI1 | 2016 | 12 |
| 7M53 | 2021 | 12 |
| 3QH4 | 2011 | 12 |
| 4G50 | 2012 | 12 |
| 3MEN | 2010 | 12 |
| 3MEQ | 2010 | 12 |
| 3IXC | 2009 | 12 |
| 3SBX | 2011 | 12 |
| 4G5D | 2012 | 12 |
| 7RA8 | 2021 | 12 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 6xdh | - | https://academic.oup.com/bib/article-abstract/22/2/1476/6146769 | A molecular modelling approach for identifying antiviral selenium-containing heterocyclic compounds that inhibit the main protease of SARS-CoV-2: an in silico | 2021 | A Rakib, Z Nain, SA Sami, S Mahmud- Briefings in, 2021 - academic.oup.com | Abstract. Coronavirus disease 2019 (COVID-19), an infectious disease caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), has been declar. ... For docking analysis, the following receptors were selected: PDB ID 6M3M for N protein, PDB ID 2GHV for the RBD of the S protein, PDB ID 6W9C for PLpro, PDB ID 6 M71 for RdRp, PDB ID 6ZSL for SARS-CoV-2 helicase (nsp13), 6WC1 for nsp9 RNA-replicase, and 6XDH for nsp15 |
| 2 | 5eo6 | - | http://search.proquest.com/openview/8ed519e66d770fcd1d89f1dbb2d646ac/1?pq-origsi... | A Molecular, Structural, and Cellular Multiple-Level Study Aimed at Understanding the Unique Reaction Catalyzed by the Last Enzyme in the Heme-Biosynthesis | 2018 | AIC Luna - 2018 - search.proquest.com | Overlay of the structures of a representative heme b-bound chlorite dismutase and solvent This research aimed to understand ChdC function at the molecular, structural , and cellular levels The coproheme-bound ChdC structure revealed a helical-loop that is flexible and moves |
| 3 | 5eo6 | - | https://scholarworks.montana.edu/xmlui/handle/1/14685 | A molecular, structural, and cellular multiple-level study aimed at understanding the unique reaction catalyzed by the last enzyme in the heme-biosynthesis pathway of | 2018 | AI Celis Luna - 2018 - scholarworks.montana.edu | Overlay of the structures of a representative heme b-bound chlorite dismutase and solvent This research aimed to understand ChdC function at the molecular, structural , and cellular levels The coproheme-bound ChdC structure revealed a helical-loop that is flexible and moves |
| 4 | 2kok | - | https://core.ac.uk/download/pdf/288178756.pdf | AMPLIFICAO E CLONAGEM DO GENE draB de Azospirillum brasilense | 2017 | F Pinhelli - core.ac.uk | melhor proteína-molde para o modelamento de DraB uma Arsenato redutase (arsC) de Brucella melitensis, cujo o número de acesso ao PDB é Bm-YffB ou 2kok. Elas possuem 23% de identidade, |
| 5 | 4mow | - | https://microbialcellfactories.biomedcentral.com/articles/10.1186/s12934-016-059... | Anaerobic poly-3-D-hydroxybutyrate production from xylose in recombinant Saccharomyces cerevisiae using a NADH-dependent acetoacetyl-CoA reductase | 2016 | AM de las Heras - Microbial Cell , 2016 - microbialcellfactories.biomedcentral. | ... Since the crystal structures of these AARs were not available, protein structures were made ... protein sequence identity to the C. necator AAR whose crystal structure was used ... Both S. wolfei homology models (Swol_0651 modelled on PDB: 4MOW [27] and Swol_1910 modelled ... |
| 6 | 3dmo | 3mpz | http://meriva.pucrs.br/dspace/handle/10923/5732 | Análise bioquímica, estrutural e funcional da enzima citidina deaminase (EC 3.5. 4.5) de Mycobacterium tuberculosis H37Rv | 2014 | ZAS Quitian - 2014 - meriva.pucrs.br | ... This work presents the crystal structures of MtCDA in complex with uridine (2.4 Å resolution) and ...process, showing that structural flexibility of some residues are important to product binding. ... MtCDAstructure. The role of the conserved glutamate-47 (E47) residue was ... |
| 7 | 3e5y | - | http://link.springer.com/article/10.1007/s12038-015-9554-0 | Analysis of coreperiphery organization in protein contact networks reveals groups of structurally and functionally critical residues | 2015 | AE Isaac, S Sinha - Journal of biosciences, 2015 - Springer | ... residues are in the innermost cores, suggesting that the network core is critically important in maintaining the structural stability of ... 2.1 Protein structure analysis. ... set of 66 non-redundant protein structures obtained from the Protein Data Bank ( http://www.rcsb.org/pdb ) that include ... For the exceptions, viz., proteins with PDB ids 1a30, 1aac, 1auw, 1cbr, 1vl4, 3e5y and 3js3, we verified that those proteins among this group ( |
| 8 | 3ix6 | - | https://www.nature.com/articles/s41598-019-48940-5 | Analysis of mutations leading to para-aminosalicylic acid resistance in Mycobacterium tuberculosis | 2019 | B Pandey, S Grover, J Kaur, A Grover- Scientific reports, 2019 - nature.com | crystal structures of the ThyA enzyme in Brucella melitensis (PDBID: 3IX6 ), M. tuberculosis 3QJ7) 20 , Enterococcus faecalis ( PDB IF: 6QYA), and Escherichia coli ( PDB ID: 1AXW Comparative analysis of the binding free energy, secondary structure elements, and free energy |
| 9 | 3qxz | 3i3f, 3s6o | https://scholarworks.iupui.edu/handle/1805/17959 | Analysis of Pseudo-Symmetry in Protein Homo-Oligomers | 2018 | CJR Rajendran - 2018 - scholarworks.iupui.edu | Figure 3.2: PDB File format In a PDB file, as mentioned in the above figure 3.2, the Atom type is used to capture the structures are calculated to get the overall structural index Structure Index for Trimers can be calculated by measuring the distance between the original |
| 10 | 5b8f | 3qxz, 3i3f | https://scholarworks.iupui.edu/handle/1805/13161 | Analysis of Pseudo-Symmetry in Protein Oligomers and its Correlation with Protein Dynamics | 2017 | K Shankar - 2017 - scholarworks.iupui.edu | ... In fig.5.1, the protein with pdb code 1e9g is used to illustrate the structures generated to achievethe calculation. ... Fig. 5.2.: Structure Index in dimer 1e9g: Structural alignment of chain A with chainB generates A and chain B with A generates B. The difference between newly ... |