We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 6X79 | 2020 | 27 |
| 6BFU | 2017 | 26 |
| 7JZM | 2020 | 26 |
| 6WS6 | 2020 | 26 |
| 6TYS | 2020 | 25 |
| 7RAL | 2021 | 24 |
| 7LY3 | 2021 | 23 |
| 7JV2 | 2021 | 23 |
| 3P96 | 2010 | 21 |
| 6Q05 | 2020 | 21 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3enk | - | http://bmcstructbiol.biomedcentral.com/articles/10.1186/1472-6807-10-1 | Molecular modeling of the reductase domain to elucidate the reaction mechanism of reduction of peptidyl thioester into its corresponding alcohol in non- | 2010 | B Manavalan, SK Murugapiran - BMC structural , 2010 - bmcstructbiol.biomedcentral.com | ... The structure of the VR (PDB code 2p4h; 310 residues) and a dTDP-glucose 4,6-dehydratase(PDB code 1r6d; 322 residues) showed ... In addition, we used 2p4h as the baseline point andsuperimposed it onto the PDB structures listed in Table 1. The root-mean-square ... 3enk. ... |
| 2 | 3ke1 | - | http://onlinelibrary.wiley.com/doi/10.1002/cmdc.201000083/full | Thiazolopyrimidine Inhibitors of 2‐Methylerythritol 2, 4‐Cyclodiphosphate Synthase (IspF) from Mycobacterium tuberculosis and Plasmodium falciparum | 2010 | JG Geist, S Lauw, V Illarionova, B Illarionov, et al. ChemMedChem (2010) 5:1092-1101 | ...[11] T.E. Edwards, D.R. Davies, R. Hartley, W. Zeller, unpublished results. PDB code: 3KE1.... |
| 3 | 2ke0 | - | http://www.ingentaconnect.com/content/ben/cmc/2010/00000017/00000015/art00005 | In silico prediction of binding sites on proteins | 2010 | S Leis, S Schneider, M Zacharias - Current medicinal chemistry, 2010 - ingentaconnect.com | ... 15 Leis et al. Table 3. Protein Test Structures pdb entry molecule state ligand Rmsd (?)b 2ANO E.coli dihydrofolate reductase bound Inh. MS-SH08-17 0 ... 1FKS_2VCD 1FKS based on 2VCD structure homology --- 2.3 1FKS_2KE0 1FKS based on 2KE0 structure homology --- 2.6 ... |
| 4 | 3cez | 3cxk, 3eoo | http://www.jbc.org/content/285/43/33315.short | Insights into function, catalytic mechanism, and fold evolution of selenoprotein methionine sulfoxide reductase B1 through structural analysis | 2010 | FL Aachmann, LS Sal, HY Kim, SM Marino? - Journal of Biological Chemistry, 2010 - ASBMB | ... Relative to MsrB1, the crystal structures of MsrBs from N. gonorhoeae (PDB code 1L1D) (8), X. campestris (PDB code 3HCI) (36), B. pseudomallei (PDB code 3CEZ/3CXK), S. pneumoniae (PDB code 3E0M) (31), and B. subtilis (3E0O) (31), as well as the solution structure of B ... |
| 5 | 3d5t | 3doc | http://www.sciencedirect.com/science/article/pii/S0301462210002437 | 'Cold spots' in protein cold adaptation: Insights from normalized atomic displacement parameters (< i> B'</i>-factors) | 2010 | A Siglioccolo, R Gerace, S Pascarella - Biophysical chemistry, 2010 - Elsevier | ... Growth temperature of the microorganism sources of the selected proteins were taken from thedatabank DSMZ (http://www.dsmz.de/, Deutsche Sammlung von ... Family, Source a, Growth T (?C) b, Pdb ID c, Res. ... Burkholderia pseudomallei, 40, 3D5T, 2.51, 253/328 (77%), 2, 331. ... |
| 6 | 3gvg | - | http://www.springerlink.com/index/C7W2222G6X226326.pdf | Triosephosphate isomerase: a highly evolved biocatalyst | 2010 | RK Wierenga, EG Kapetaniou, R Venkatesan - Cellular and molecular life Sciences, 2010 - Springer | ... 1AW2 M. marina No SO4 Dimer 2.65 20.0 21.9 3GVG M. tuberculosis No Dimer 1.55 14.5 16.9 1R2R O. cuniculus No Dimer 1.5 16.1 19.0 ... 3967 Page 8. Table 1 continued pdb code Source Mutant Active site ligand Oligomeric state Resolution (A? ) Rcryst (%) Rfree (%) ... |
| 7 | 3gp5 | - | http://www.jbc.org/content/285/27/21049.short | Structure and Activity of the Metal-independent Fructose-1, 6-bisphosphatase YK23 from Saccharomyces cerevisiae | 2010 | E Kuznetsova, L Xu, A Singer, G Brown, A Dong? - Journal of Biological Chemistry, 2010 - ASBMB | ... of YK23 was solved to 1.75-? resolution using selenomethionine-substituted protein and multiple wavelength anomalous dispersion (PDB code 3F3K ... 2a6p; Z-score 23.7; rms deviation 1.9 ?), the phosphoglyceromutase GpmA from Burkholderia pseudomallei (3gp5; Z-score ... |
| 8 | 3ecd | 3h7f | http://www.sciencedirect.com/science/article/pii/S0141813009002098 | Structural adaptation of serine hydroxymethyltransferase to low temperatures | 2010 | A Siglioccolo, F Bossa, S Pascarella - International journal of biological Macromolecules, 2010 - Elsevier | ... Table 5. List of representative structures of SHMT currently available in the Protein Data Bank. PDB id Resolution (Å) Biological source 3ECD 1.60 Burkholderia pseudomallei. ... |
| 9 | 3kre | - | http://scripts.iucr.org/cgi-bin/paper?fw5260 | Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of SAICAR synthase from Streptococcus suis serotype 2 | 2010 | X Cheng, G Lu, J Qi, H Cheng, F Gao? - Acta Crystallographica Section F Structural Biology and Crystallization Communications, 2010 - scripts.iucr.org | ... F62, 335-339.] ), Ehrlichia chaffeensis (PDB code 3kre ; Seattle Structural Genomics Center for Infectious Disease, unpublished work) and Pyrococcus horikoshii OT3 (Manjunath et al., 2010 [Manjunath, K., Jeyakanthan, J., Nakagawa, N., Shinkai, A., Yoshimura, M., Kuramitsu, S ... |
| 10 | 3d6b | 3ii9, 3i3r, 3kjr | https://www.annualreviews.org/doi/abs/10.1146/annurev.biophys.050708.133630 | Protein crystallization using microfluidic technologies based on valves, droplets, and SlipChip | 2010 | L Li, RF Ismagilov- Annual review of biophysics, 2010 - annualreviews.org | was compared with current state-of-the-art technologies at the Seattle Structural Genomics Center crystal structures were solved at higher resolutions higher than those for structures solved at at 1.73 (PDBid:3II9) compared to 2.2 at SSGCID (PDBid: 3D6B ), and dihydrofolate |