SSGCID
Seattle Structural Genomics Center for Infectious Disease

SSGCID models

Structures predicted by homology modelling with Robetta or modelled de-novo with evolutionary constraints using GREMLIN and Rosetta.

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Results: 547

Model Method Target Status Annotation Organism Community
IPD_81922 comparative modelling ButhA.17369.b diffraction Transcription termination factor Rho (EC 3.6.4.-) (ATP-dependent helicase Rho) (BTH_I2217) (rho) Burkholderia thailandensis request
IPD_82003 comparative modelling ChtrB.00612.a diffraction Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS) Chlamydia trachomatis request
IPD_79386 comparative modelling CrfaA.19501.a expressed JBP3 (glucosyl transferase interacting protein 2) (GTIP2) Crithidia fasciculata request
IPD_79398 comparative modelling LeinA.19526.a expressed WDR82 homologue (glucosyl transferase interacting protein 1) (GTIP1) Leishmania infantum request
IPD_79401 comparative modelling LetaA.19530.a expressed J-binding protein 1 (JBP1) Leishmania tarentolae request
IPD_79409 comparative modelling LemaA.19530.a expressed J-binding protein 1 (JBP1) Leishmania major request
IPD_79413 comparative modelling TrcrB.19530.b expressed J-binding protein 1 (JBP1) Trypanosoma cruzi request
IPD_79416 comparative modelling CrfaA.19530.a expressed J-binding protein 1 (JBP1) Crithidia fasciculata request
IPD_79418 comparative modelling TrcrB.19530.a expressed J-binding protein 1 (JBP1) Trypanosoma cruzi request
IPD_79422 comparative modelling LebrA.19530.a expressed J-binding protein 1 (JBP1) Leishmania braziliensis request
IPD_79424 comparative modelling LeinA.19530.a expressed J-binding protein 1 (JBP1) Leishmania infantum request
IPD_79426 comparative modelling LemaA.19527.a expressed Glucosyl transferase (HmdUGT) Leishmania major request
IPD_79434 comparative modelling LemaA.19528.a expressed J-binding protein 2 (JBP2) Leishmania major request
IPD_79436 comparative modelling LemeA.19528.a expressed J-binding protein 2 (JBP2) Leishmania mexicana request
IPD_79437 comparative modelling TrcrB.19528.b expressed J-binding protein 2 (JBP2) Trypanosoma cruzi request
IPD_81174 comparative modelling MygeA.00163.a expressed Phenylalanine--tRNA ligase alpha subunit (MG_194) Mycoplasma genitalium interest
IPD_82008 comparative modelling ChtrB.00163.a expressed Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS) Chlamydia trachomatis request
IPD_82031 comparative modelling ChtrB.19228.a expressed Pseudouridine synthase (EC 5.4.99.-) Chlamydia trachomatis request
IPD_85038 comparative modelling NegoA.00784.a expressed thioredoxin-disulfide reductase Neisseria gonorrhoeae request
IPD_ma-4jcjk de-novo with evolutionary constraints ChtrB.00163.a expressed Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS) Chlamydia trachomatis request
IPD_10690 comparative modelling AccaA.19900.a in PDB Glucokinase Acanthamoeba castellanii request
IPD_10691 comparative modelling BamaA.19900.a in PDB Glucokinase Balamuthia mandrillaris request
IPD_15652 comparative modelling BewuA.18655.a in PDB Spike glycoprotein (S) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15672 comparative modelling BewuA.18928.a in PDB orf1ab polyprotein NendoU (Uridylate-specific endoribonuclease) (nsp15) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_2683 comparative modelling LpboA.19679.a in PDB Uncharacterized protein Leptospira borgpetersenii request