SSGCID
Seattle Structural Genomics Center for Infectious Disease

SSGCID models

Structures predicted by homology modelling with Robetta or modelled de-novo with evolutionary constraints using GREMLIN and Rosetta.

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Results: 547

Model Method Target Status Annotation Organism Community
IPD_14044 comparative modelling MygeA.19932.a target approved Putative ABC transporter ATP-binding protein MG014 (MG_014) Mycoplasma genitalium internal
IPD_14045 comparative modelling MygeA.20192.a target approved Uncharacterized protein MG459 (MG_459) Mycoplasma genitalium internal
IPD_14046 comparative modelling MygeA.18481.a target approved ATP synthase subunit b (MG_403) Mycoplasma genitalium internal
IPD_14975 comparative modelling BrabA.17285.c diffraction Solute-binding protein/glutamate receptor:Ionotropic glutamate receptor:Bacterial extracellular solute-binding protein, family 3 Brucella melitensis internal
IPD_15652 comparative modelling BewuA.18655.a in PDB Spike glycoprotein (S) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15657 comparative modelling BewuA.20418.a selected ORF7a Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15661 comparative modelling BewuA.18928.a selected orf1ab polyprotein nsp1 Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15666 comparative modelling BewuA.18928.a purified orf1ab polyprotein nsp7 Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15667 comparative modelling BewuA.18928.a purified orf1ab polyprotein nsp8 Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15668 comparative modelling BewuA.18928.a purified orf1ab polyprotein nsp9 Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15669 comparative modelling BewuA.18928.a purified orf1ab polyprotein nsp10 Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15670 comparative modelling BewuA.18928.a cloned orf1ab polyprotein RdRp (RNA-directed RNA polymerase) (nsp12) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15671 comparative modelling BewuA.18928.a purified orf1ab polyprotein ExoN (Guanine-N7 methyltransferase) (nsp14) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15672 comparative modelling BewuA.18928.a in PDB orf1ab polyprotein NendoU (Uridylate-specific endoribonuclease) (nsp15) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15673 comparative modelling BewuA.18928.a purified orf1ab polyprotein nsp16 (2prime-O-methyltransferase) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15727 comparative modelling BewuA.18651.a purified Nucleoprotein (N) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15732 comparative modelling BewuA.18928.a target approved orf1ab polyprotein PL-PRO (Papain-like proteinase) (nsp3) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15733 comparative modelling BewuA.18928.a selected orf1ab polyprotein nsp4 Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_2670 comparative modelling ChtrB.20260.a soluble Uncharacterized protein (CT135) Chlamydia trachomatis request
IPD_2673 comparative modelling LpinA.19796.a purified Putative lipoprotein Leptospira interrogans request
IPD_2675 comparative modelling LpinA.17356.a purified OppA Leptospira interrogans request
IPD_2676 comparative modelling LpinA.19564.a purified HD-GYP hydrolase domain protein Leptospira interrogans request
IPD_2677 comparative modelling LpinA.00107.a purified Heavy metal efflux pump Leptospira interrogans request
IPD_2678 comparative modelling LpinA.19824.a purified Putative lipoprotein Leptospira interrogans request
IPD_2679 comparative modelling LpinA.19843.a purified Disulfide interchange transmembrane protein Leptospira interrogans request