We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 5U1P | 2016 | 0 |
| 8SBY | 2023 | 0 |
| 8SBZ | 2023 | 0 |
| 5U2A | 2016 | 0 |
| 5U2I | 2017 | 0 |
| 5U4N | 2016 | 0 |
| 5UAI | 2017 | 0 |
| 5UCR | 2017 | 0 |
| 5UFT | 2017 | 0 |
| 5UJF | 2017 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3k9w | - | http://ir.inflibnet.ac.in:8080/jspui/bitstream/10603/184372/13/13_refernces.pdf | Structural and functional characterization of type three secretion associated proteins from Yersinia enterocolitica and vitamin biosynthesis pathway proteins from | 2016 | R Chatterjee - 2016 - ir.inflibnet.ac.in | Crystal structures of homologues of SycB from PDB (SycD[2VGX], IpgC[3- GYZ], PcrH[2XCC]) showed that Consensus server of secondary structure prediction showed that SycB has 75.7% of helix and rest of Expression, Purification, Structural and Functional Analysis of SycB |
| 2 | 3kre | - | http://www.freepatentsonline.com/y2019/0209493.html | NOVEL APPLICATIONS OF SPERMINE AND DERIVATIVES THEREOF | 2019 | W Pan, W Zhu- US Patent App. 16/334,273, 2019 - freepatentsonline.com | Thermotoga maritime (1KUT), Clostridium perfringens (3NUA), Ehrlichia chaffeensis ( 3KRE ), Geobacillus kaustophilus On the basis of the above results, the crystal structure conformations in of Saccharormyces cerevisiae ( PDB : 2CNQ) and Escherichia coli ( PDB : 2GQS) are |
| 3 | 2lwk | - | https://www.biorxiv.org/content/biorxiv/early/2021/01/10/2021.01.10.426061/DC1/e... | Supporting Information for Occurrences of protonated base triples in RNA are determined by their cooperative binding energies and specific functional | 2021 | A Halder, A Jhunjhunwala, D Bhattacharyya, A Mitra - biorxiv.org | Figure S1: Context of occurrences of G(CC) H:+ Trans/W:W Cis triple (System 2). 2D representation of (A) the 5S rRNA, (B) Domain III of 25S rRNA of S. cerevisiae and (C) HDV ribozyme are shown and the structural motifs that contain (G) 3D structure of the PDB : 3KIR Chain: A |
| 4 | 3laa | - | http://archive.hshsl.umaryland.edu/handle/10713/3641 | Functional Analysis of the Polymorphic Membrane Protein Family of Chlamydia | 2013 | V Grinblat-Huse - 2013 - archive.hshsl.umaryland.edu | ... The trimeric autotransporter adhesin head domain [RCSB indentifier 3LAA] from Burkholderia pseudomallei and the outer membrane adhesin/invasin [RCSB identifier 1K24] from Neisseria meningitidis were also used to attempt a structure prediction ... |
| 5 | 3ngj | - | http://www.jbc.org/content/295/2/597.short | Rational engineering of 2-deoxyribose-5-phosphate aldolases for the biosynthesis of (R)-1, 3-butanediol | 2020 | T Kim, PJ Stogios, AN Khusnutdinova, K Nemr- Journal of Biological, 2020 - ASBMB | DERA structures as the best matches, including the Entamoeba histolytica DeoC ( PDB code 3NGJ ; Z score RMSD, 0.6 ; 66% sequence identity), and L. brevis DERA E78K mutant ( PDB code 4XBS; Z Based on the BH1352 structure , its active site is located inside of the -barrel |
| 6 | 6bfu | - | https://jvi.asm.org/content/early/2021/01/06/JVI.02284-20.abstract | Insight into vaccine development for Alpha-coronaviruses based on structural and immunological analyses of spike proteins | 2021 | Y Shi, J Shi, L Sun, Y Tan, G Wang, F Guo- Journal of, 2021 - Am Soc Microbiol | recognition pattern, especially the structure of the RBD and its state in the S-trimer, 112 Structural and immunological analyses of alpha- and beta-coronaviruses spike 124 proteins 125 To date, multiple S-trimer structures of coronaviruses have been resolved (12-14, 126 |
| 7 | 3js4 | - | http://escholarship.org/uc/item/2t44h65b.pdf | Highly Active Yeast MnSOD has a Novel Mechanism Involving Six-coordinate Mn (3+) Species | 2012 | Y Sheng - 2012 - escholarship.org | ... The enzyme structures of four classes of SOD. (A) Homo sapien CuZnSOD (pdb code: 1PU0); (B) Streptomyces coelicolor NiSOD (pdb code: 1T6U); (C) Saccharomyces cerevisiae MnSOD (pdb code: 3LSU); (D) Anaplasma phagocytophilum FeSOD (pdb code: 3JS4). Page 22. ... |
| 8 | 4ex4 | - | http://pubs.acs.org/doi/abs/10.1021/acs.biochem.7b00852 | Structural and Functional Characterization of Malate Synthase G from Opportunistic Pathogen Pseudomonas aeruginosa | 2017 | AC McVey, P Medarametla, X Chee, S Bartlett- Biochemistry, 2017 - ACS Publications | ... G. Inactivation of these enzymes has been reported to abolish the ability of P. aeruginosa to establish infection in a mammalian model system, yet we still lack the structural information to support drug design efforts. In this work, we describe the first X-ray crystal structure of P ... |
| 9 | 5unb | - | https://www.sciencedirect.com/science/article/pii/S0091674919316021/pdf?md5=51ff... | Janus kinase inhibition for autoinflammation in patients with DNASE2 deficiency | 2020 | Y Hong, M Capitani, C Murphy, S Pandey- Journal of Allergy and, 2020 - Elsevier | Structural modelling Structural models and figures were prepared using the ICM software package (Molsoft). A homology model for human DNase II was prepared using the existing structure from Burkholderia thailandensis ( PDB 5unb ) as the model template |
| 10 | 4ggq | - | http://search.proquest.com/openview/219528695acb361301dd8d5055c2fd4a/1?pq-origsi... | Structural studies of the mechanism by which Bcl-2 and Beclin proteins regulate autophagy and apoptosis | 2016 | M Su - 2016 - search.proquest.com | ... Amongst nearly 120000 structures deposited in the Protein Data Bank ( PDB ) to date, 107000 are X-ray ... of left-handed and right-handed circularly polarized light, is often used to investigate structural aspects of ... CD can be used to determine the secondary structure of proteins. ...The atomic structures of MBP (extracted from PDB code 4GGQ), SUMO (extracted from PDB code 1L2N) and Beclin 2:Atg14 |