We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 7TY0 | 2022 | 0 |
| 7TXZ | 2022 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3cez | 3cxk | http://link.springer.com/chapter/10.1007/978-94-017-8742-0_11 | Evolution of Structural and Coordination Features Within the Methionine Sulfoxide Reductase B Family | 2014 | E Shumilina, O Dobrovolska, A Dikiy - The Structural Basis of Biological , 2014 - Springer | Figure V.2.2. Three-dimensional structure of Zn-binding site and thecorresponding regions of MsrBs family. For the explanation see text. A - MsrB1, M.musculus, 2KV1, [123]; B - MsrB1, H. sapience , 3MAO, not published; C - MsrB2, M.musculus, 2L1U, [125]; D - MsrB, X. campestris, 3HCI, [124]; E -B. pseudomallei,3CEZ/3CXK, not published; http://www.diva-portal.org/smash/get/diva2:603697/FULLTEXT02.pdf |
| 2 | 2khr | 2kvc | http://search.proquest.com/openview/fc1652af707b4e47ebd729008cd8ea6d/1?pq-origsi... | Investigating conformational transitions of proteins by coarse-grained elastic network models | 2012 | M Tekpinar - 2012 - search.proquest.com | The model is the green tube representation and the target ( PDB ID: 1LST) is the dark blue tube. Residues 91 B- factors show that each atom in the structure is dynamic in side chains of their amino acids. However, some conformations can have large structural |
| 3 | 3meb | 4otl, 4f4f | http://digitalcommons.unl.edu/chemistrydiss/86/ | Bioinformatic and Biophysical Analyses of Proteins | 2017 | J Catazaro - 2017 - digitalcommons.unl.edu | structure of every protein encoded within a particular genome, the aim is to concentrate to steadily produce structural representatives of previously uncharacterized genes. Although the new structures have been deposited in the Protein Data Bank ( PDB ) 4 |
| 4 | 5cy4 | - | https://munin.uit.no/handle/10037/17279 | A functional and structural study of three bacterial nucleic acid-interacting proteins. The story of a Ferric Uptake Regulator, an Oligoribonuclease and an ATP | 2020 | K Berg - 2020 - munin.uit.no | Acinetobacter baumannii (PDB 5CY4) and E. coli (PDB code 1YTA )[148]. All Orn homologs are structurally similar and topologically arranged |
| 5 | 5dd7 | - | https://repository.up.ac.za/handle/2263/77810 | Structural and inhibition studies of thiamine monosphosphate kinase from Mycobacterium tuberculosis | 2020 | LS Dlamini - 2020 - repository.up.ac.za | OT Oxythiamine PDB Protein data bank 38 Figure 3.5: Crystal structure of MtbThiL homodimer ..... 40 bind to both free enzyme and the ES complex. Detailed structural information particularly high resolution crystal structures of substrate |
| 6 | 3kc6 | 3khw, 4p9a | https://core.ac.uk/download/pdf/196247958.pdf | Identification and characterization of mammalian signatures of viral adaptation: a computational approach | 2015 | A Marquardt - 2015 - core.ac.uk | Table 2.2: Table showing the in different subtypes used in this work with proteins that have subtype specific structures available with corresponding pdb identifier, which are imple |
| 7 | 2kwl | 2lky, 2lol | http://repositoriodigital.uns.edu.ar/handle/123456789/2489 | Aspectos estructurales y dinmicos en la relajacin de sistemas complejos, con nfasis en agua lquida, sobreenfriada y nanoconfinada | 2015 | SR Accordino - 2015 - repositoriodigital.uns.edu.ar | prctico: previene la agregacin de dos placas de grafeno. Page 9. 9 Abstract In this Thesis we studied, by means of molecular dynamic simulations, the structural and We also determined the geometrical quality of the local structure of these kinds of molecules. In |
| 8 | 3kzx | 3p96 | https://open.bu.edu/handle/2144/15107 | Sequence-and structure-based approaches to deciphering enzyme evolution in the Haloalkonoate Dehalogenase superfamily | 2014 | C Pandya - 2014 - open.bu.edu | ... , all , + and /20. Importantly, ~10% of domain combinations in the Protein Data Bank(PDB) are domain insertions. ... It performs structure-based alignment and secondary-structure comparison to identify conserved and inserted secondary structural elements. ... |
| 9 | 3d64 | 3lls, 3qk8, 3ome, 3n58, 3oq8, 3myb, 3p5m, 3sll, 3i4e | http://www.freepatentsonline.com/y2015/0353606.html | PEPTIDOMIMETIC COMPOUNDS | 2015 | RT Skerlj, AC Good - US Patent 20,150,353,606, 2015 - freepatentsonline.com | ... TABLE 2. PDB ID, Key Cysteine residue. 3dp7, CYS10. 1nhw, CYS100. 1q51, CYS102. ... 1x9j,CYS227. 3n58, CYS231. 3d64, CYS238. 3ond, CYS244. ... In general the term helix or helicalis used to refer to any type of helical structure, including 3 10 -helices, -helices and -helices ... |
| 10 | 3iml | 3dms, 3hja, 3gtd, 3mbf, 3sth, 3s82, 3qbp, 3l0d, 3kx6, 4oh7, 4xfj, 4tu1 | http://www.tandfonline.com/doi/abs/10.1080/23312025.2017.1291877 | Investigation of intrinsic dynamics of enzymes involved in metabolic pathways using coarse-grained normal mode analysis | 2017 | SM Meeuwsen, AN Hodac, LM Adams - Cogent , 2017 - Taylor & Francis | ... (3IML), and M. avium (3S82) MATs together. The dynamics of 3IML are more similar to the ... 6) toassist in the open and closed conformations of the enzyme. Ornithine transcarbamylase (PDBcode: 4OH7; chains A and B of the homotrimer were ... Visualization of the structure ... |