We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 6O4N | 2019 | 0 |
| 6O3F | 2019 | 0 |
| 6NUP | 2019 | 0 |
| 6NRZ | 2019 | 0 |
| 6NHI | 2019 | 0 |
| 6NDR | 2018 | 0 |
| 6NBM | 2019 | 0 |
| 6NB2 | 2019 | 0 |
| 6NB0 | 2018 | 0 |
| 6N1M | 2018 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 4j07 | - | http://informahealthcare.com/doi/abs/10.1517/17460441.2013.826188 | The eradication of leprosy: molecular modeling techniques for novel drug discovery | 2013 | S Anusuya, J Natarajan - Expert opinion on drug discovery, 2013 - informahealthcare.com | ... M. leprae (Table 1) were elucidated using X-ray diffraction methods and were deposited in ProteinData Bank (PDB). ... In case of the structure of riboflavin synthase (PDB ID: 4JO7), the resolution is 1.95 ? which ... Table 2. Results of Ramachandran plot analysis for 1BVS and 4J07. ... |
| 2 | 3iml | - | http://31.24.0.66/bj/452/bj4520027add.pdf | Insight into S-adenosylmethionine biosynthesis from the crystal structures of the human methionine adenosyltransferase catalytic and regulatory subunits | 2013 | N SHAFQAT, JRC MUNIZ, ES PILKA? - Biochem. J, 2013 - 31.24.0.66 | ... sequences include hMAT1A (PDB code 2OBV; Uniprot ID Q00266), hMAT2A (PDB code 2P02; Uniprot ID P31153), rMAT1A (PDB code 1O9T; Uniprot ID P13444), eMAT (PDB code 1RG; Uniprot ID P0A817) and Burkholderia pseudomallei MAT (PDB code 3IML; Uniprot ID ... |
| 3 | 4f0l | - | http://search.proquest.com/openview/fef1d24d7e6ff92856571d1305df8aa5/1?pq-origsi... | Structural and Biochemical Studies of C. jejuni Agmatine Deiminase, E. coli Guanine Deaminase, and S. cerevisiae Guanine Deaminase | 2019 | R Shek - 2019 - search.proquest.com | to uric acid by xanthine oxidase. Figure 1.4. Structure of triose phosphate isomerase. PDB : 6B2W. The beta strands that make up the TIM barrel are shown in red. Page 24. 11 catalyze deamination reactions, the two families differ substantially in their structural architectures. 27 |
| 4 | 2khp | - | http://rave.ohiolink.edu/etdc/view?acc_num=akron1524681449524557 | NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY IN THE STUDY OF PROTEIN-LIGAND INTERACTIONS | 2018 | DL Morris - 2018 - rave.ohiolink.edu | Structures of target proteins were obtained from the Protein Data Bank (PDB). The PBD code for BrmGRX is 2KHP and hGRX1 is 1JHB. |
| 5 | 6q04 | - | https://www.biorxiv.org/content/10.1101/2021.02.09.430519v1.abstract | Transformations, Comparisons, and Analysis of Down to Up Protomer States of Variants of the SARS-CoV-2 Prefusion Spike Protein Including the UK Variant B. 1.1. 7 | 2021 | O Basidas, D Kokron, CE Henze- bioRxiv, 2021 - biorxiv.org | Clustal Omega uses a structure guided hidden Markov model (HMM) for multiple sequence alignment. Sequences were obtained directly from the PDB files across four different corona viruses SARS-CoV (6ACD) [14], SARS-CoV-2 (6VSB) [10], MERS-CoV ( 6Q04 ) [20], and |
| 6 | 3krb | - | https://repositorio.ul.pt/handle/10451/2032 | Methylglyoxal metabolism in Leishmania infantum | 2010 | LIS Barata - 2010 - repositorio.ul.pt | ...Besides the human enzyme, there are also accessible other aldose reductase structures from other organisms, including the protozoan Giardia lamblia (PDB entry 3KRB (Seattle Structural Genomics Center for Infectious Disease, to be published)) and the mammal Sus scrofa (PDB entry 1AH4 (Urzhumtsev et al. 1997)).. ... |
| 7 | 5dvw | - | https://etd.ohiolink.edu/!etd.send_file?accession=kent1511199228856908&dispositi... | Evolutionary Trends in Viral Pathogens within and between Outbreaks | 2017 | ME Saha - 2017 - etd.ohiolink.edu | for VP35 the 3FKE and 4YPI maps were used. For the other VP proteins: maps 4LDD and 4LDB for VP40, maps 2I8B and 5DVW |
| 8 | 6uld | - | https://pubs.acs.org/doi/abs/10.1021/acsinfecdis.5c00996 | The Pyridoxal-5-Phosphate-Dependent Enzymes of Mycobacterium tuberculosis | 2026 | A Peracchi, B Baker- ACS Infectious Diseases, 2026 - ACS Publications | from the PDB database (sequences derived from structural studies). Initially this search yielded 87 hits, many of which, however, were not pertinent (such as enzymes involved in the |
| 9 | 6uww | - | https://onlinelibrary.wiley.com/doi/abs/10.1155/bmri/4196295 | In Silico Investigation of Phytochemicals From Clinically Tested Herbal Extracts as Potential Dihydrofolate Reductase Inhibitors for Buruli Ulcer | 2025 | AAK Mohamed, T Woasiedem- BioMed Research, 2025 - Wiley Online Library | original Schrdinger-prepared structure . This PDB structure , while Schrdinger retains the original biological residue numbering from the full-length protein sequence ( PDB ID: 6UWW ). |
| 10 | 7jzl | 7jzn | https://pmc.ncbi.nlm.nih.gov/articles/PMC12308813/ | Exploring the Intrinsic Structural Plasticity and Conformational Dynamics of Human Beta Coronavirus Spike Glycoproteins | 2025 | YF e Silva, HH Fokoue- Journal of Chemical, 2025 - pmc.ncbi.nlm.nih.gov | Such information was related to each PDB -ID, but within the trimeric bound structures , we evaluate whether each protomer has interactions with the ligands by calculating the number of |