SSGCID
Seattle Structural Genomics Center for Infectious Disease

Cited Structures: list of articles citing SSGCID structures

We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.

This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.

Cited structures

Manually reviewed citations

# PDB Additional SSGCID structures cited Link Title Year Citation Highlighted abstract
1 4qhq - https://thesis.library.caltech.edu/10840/ Structural and Functional Characterization of the Escherichia coli MetNI Methionine Transporter 2018 PT Nguyen - 2018 - thesis.library.caltech.edu PTN participated in soaking experiments for the L-semethionine-bound MetNI structure ( PDB :3TUZ) and manuscript preparation. Page 12. xii transporter architecture and mechanism. Science 16. Oldham ML, Khare D, Quiocho FA, Davidson AL, Chen J. Crystal structure of a
2 3meq - http://www.redalyc.org/pdf/620/62049878004.pdf ENZYMATIC REDUCTION BY ALCOHOL DEHYDROGENASE TA1316 FROM Thermoplasma acidophilum 2017 M Guzmn-Rondrguez, L Santos - Revista Mexicana de Ingeniera , 2017 - redalyc.org ... 3MEQ Brucella melitensis ADH Tetramer Zn +2 , Cl, Na + 0.930 To be published 1R37 Sulfolobussolfataricus ADH Tetramer Zn +2 0.929 (Esposito et al. 2003) ... Structural analyses displayed by thePDB platform showed the crystal structure of Pyrobaculum aerophilum ...
3 3gwc - http://search.proquest.com/openview/aa0a9dc6c9a061aa0200e2456abf28ac/1?pq-origsi... Virtual Screening of Novel Potent Molecules Targeting enoyl-ACP reductase as Antitubercular Agents by Molecular Docking studies 2019 V Shivakumar, PM Ramsana, M Risfa- Journal of, 2019 - search.proquest.com Fig 2. Structure and portions nomenclature of linezolid V. Shivakumar et al /J. Pharm. Sci. & Res NO. PDB ID RESOLUTION ENZYMES YEAR 1 2AF6 2.01 Trymidylate synthase 2005 2 2X23 1.80 enoyl-ACP reductase 2010 3 3GWC 1.9 Trymidylate synthase 2009
4 3khw - http://www.pjps.pk/wp-content/uploads/pdfs/27/3/SUP-41.pdf 3D protein structure prediction of influenza A virus based on optimization genetic algorithm. 2014 J Gao, PX Jin, HX Xu - Pakistan journal of pharmaceutical sciences, 2014 - pjps.pk ... acid residues Sixty groups of influenza A (H1N1) virus protein were selected from PDB database, 3HTO, 4F15, 3B7E, 3BEQ, 3HTP, 3HTQ, 3HTT, 4EDB, 4B7N, 4B7M, 3M5R, 3M8A, 3LKN, 3QQ4, 3QQ3, 3TI3, 3LZF, 3M6S, 3UBE, 3UBJ, 3UBN-A, 4D9J, 3GBN, 3KHW, 4EDA, 2ZKO ...
5 5i1f - http://scripts.iucr.org/cgi-bin/paper?dp5104 Structure of the Bacillus anthracis dTDP-l-rhamnose-biosynthetic enzyme glucose-1-phosphate thymidylyltransferase (RfbA) 2017 J Baumgartner, J Lee, AS Halavaty- Section F: Structural, 2017 - scripts.iucr.org The Mg2+ ion is modeled from the RffH structure The GalU homologs are from Burkholderia vietnamiensis ( PDB entry 5i1f ; Seattle Structural Genomics Center for Infectious Disease, unpublished work) and Sphingomonas elodea ( PDB entry 2ux8), respectively
6 3khw - http://repositorio.ufpa.br/jspui/handle/2011/6781 Caracterização dos genes codificadores da hemaglutinina e PB2 do vírus Influenza A (H1N1) pandêmico isolado na mesorregião metropolitana de Belém 2012 JA FERREIRA - 2012 - repositorio.ufpa.br ... LACEN Laboratório Central MDCK Cultura de células de rim canino (Madin Darbin Canine Kidney)Mrna Ácido ribonucléico mensageiro M631L Substituição no aminoácido 631 de uma metioninapor uma leucina OMS Organização Mundial da Saúde PDB Banco de dados de ...
7 3pgz 3lgj http://www.freepatentsonline.com/y2015/0191709.html MODIFIED HELICASES 2015 A Heron, J Clarke, R Moysey… - US Patent …, 2015 - freepatentsonline.com ... In order to assess whether a suitable protein structure exists to use as a “template” to build aprotein model, a search is performed on the protein data bank (PDB) database. ... The sequencealignment and template structure are then used to produce a structural model of the ...
8 4efz - http://www.jbc.org/content/early/2015/06/16/jbc.M115.652537.short Characterizations of Two Bacterial Persulfide Dioxygenases of the Metallo-β-lactamase Superfamily 2015 SA Sattler, X Wang, KM Lewis, PJ DeHan… - Journal of Biological …, 2015 - ASBMB ... The statistics for the diffraction data are listed in Table 1. Initial phasing of apo- form PpPDO2diffraction data was conducted by molecular replacement with the PDB coordinates of model4EFZ using PHENIX Phaser (18). ... RESULTS Global Structure ...
9 3r1i - http://journals.iucr.org/f/issues/2014/10/00/no5061/no5061bdy.html Structure of a short-chain dehydrogenase/reductase (SDR) within a genomic island from a clinical strain of Acinetobacter baumannii 2014 BS Shah, SG Tetu, SJ Harrop, IT Paulsen… - Structural Biology and …, 2014 - journals.iucr.org ... [Figure 2], Figure 2 Structure of SDR ... 4g81 ; pale red), 3-oxoacyl-(ACP) reductase (Synechococcuselongatus FabG2; PDB entry 4dmm ; pale green), 3-oxoacyl-(ACP) reductase (S. aureus FabG3;PDB entry 3osu ; pale blue), M. marinum SDR (PDB entry 3r1i ; pale yellow ...
10 3rd5 - http://csc.hcmiu.edu.vn:8080/dspace/handle/123456789/494 Comparatives study on sequence structure function relationship of human short-chain dehydrogenases/reductases 2013 TTN Nu - 2013 - csc.hcmiu.edu.vn ... Table 1 : PDB code and name of five representative 4. 3rd5 chain A, Retinol dehydrogenase 11...