We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 5V0U | 2017 | 0 |
| 5V0R | 2017 | 0 |
| 5UXV | 2018 | 0 |
| 5UNL | 2017 | 0 |
| 5UM0 | 2017 | 0 |
| 5UJU | 2017 | 0 |
| 5UJF | 2017 | 0 |
| 9ZAG | 2025 | 0 |
| 9ZAO | 2025 | 0 |
| 9ZAV | 2025 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 2lxf | - | https://baylor-ir.tdl.org/handle/2104/10322 | Machine Learning-assisted Prediction of Structure and Function of Cystine-stabilized Peptides and Optimization of Expression in an E. coli System | 2018 | SMA Islam - 2018 - search.proquest.com | Each type is annotated with its name, PDB id, function and jmol estimated average 3D structural distance between disulfide bonds PBS Phosphate buffered saline PDB Protein data bank QSAR Quantitative structure activity relationship QSO Quasi-sequence-order |
| 2 | 5i3e | - | https://dukespace.lib.duke.edu/dspace/bitstream/handle/10161/14487/Schwabe_duke_... | Targeting Protein-Protein Interactions for Disruption of LSD1 (KDM1A) Complexes | 2017 | JL Schwabe - 2017 - dukespace.lib.duke.edu | (b) A predicted structural model generated used to determine sites of protein-protein interactions, which can be illustrated, for example, on available crystal structures in the CoREST samples were mapped onto an available LSD1/CoREST co-crystal structure ( PDB 2IW5) as a |
| 3 | 3fvb | - | https://circle.ubc.ca/handle/2429/13707 | Catalysis of iron core formation in Escherichia coli bacterioferritin | 2009 | S Wong - 2009 - circle.ubc.ca | ... Another example of a small molecule occupying a ferroxidase pore was recently discovered through crystallographic analysis of BFR from Brucella melitensis (PDB ID: 3FVB). This structure revealed imidazole bound to iron at the ferroxidase site such that the imidazole is located in the ferroxidase pore directly between the ferroxidase site and the pore opening. ... |
| 4 | 4l82 | - | https://d-nb.info/1169915167/34 | Identification of Biological Sulfonamide Degradation | 2018 | B Ricken - 2018 - d-nb.info | 99 4.3. Identification of enzymes responsible for SMX degradation .....103 4.4. Sulfonamides molecule structure influences biodegradability .....105 pdb|4L82| Putative Oxidoreductase Rickettsia felis |
| 5 | 3meq | - | http://www.springerlink.com/index/y386x24r70618558.pdf | Asymmetric reduction of diketones by two Gluconobacter oxydans oxidoreductases | 2012 | P Schweiger, H Gross, J Zeiser? - Applied Microbiology and Biotechnology, 2012 - Springer | ... identity, >70 % similarity) to other alcohol dehydrogenase with known 3-D structure, for example, to zinc-dependent alcohol dehydrogenases from Brucella suis (PDB, 3MEQ_A), Pseudomonas ... 2004), 3MEQ from B. suis, and 1RJW from G. stearthermophilus (Ceccarelli et al. ... |
| 6 | 3gvh | - | http://scholarsbank.uoregon.edu/xmlui/handle/1794/22884 | Investigating Bias in Protein Properties Inferred via Ancestral Sequence Reconstruction | 2017 | A Rickett - 2017 - scholarsbank.uoregon.edu | We formulate and analyze the electrostatics of 14 distinct protein families, each containing PDB structures of structural elements, send signals from cell to cell, and much more. Every protein sequence defines a unique 3-dimensional structure which a protein assumes through a |
| 7 | 2lwk | - | https://deepblue.lib.umich.edu/handle/2027.42/155127 | Using Machine Learning to Better Predict the Structure of RNA and RNA Containing Complexes | 2020 | S Chhabra - 2020 - deepblue.lib.umich.edu | 53 3.5 Top 10 RNA Structures for 2LWK predicted from sequence using CS-Fold and Rosetta structures . The statistics from Protein Data Bank ( PDB ) (http://www.rcsb.org) current understanding of the RNA structure -function relationships is limited due to |
| 8 | 5b8i | - | https://www.biorxiv.org/content/10.1101/813717v1.abstract | Biochemical, Biophysical, and Functional Analyses of Two Isoforms of the SnRK2 inhibitor AtSCS | 2019 | K Tarnowski, M Klimecka, A Ciesielski, G Goch, A Kulik- bioRxiv, 2019 - biorxiv.org | 5a, 02-106 Warsaw, Poland 20 2 Warsaw University, Department of Chemistry, Pasteura 1, 02-093 Warsaw, Poland 21 3 The Norwegian Center for Structure Biology, Institute of Chemistry, University of 22 Functional and structural studies showed that PP2Cs 110 |
| 9 | 5f23 | 5tw7, 5kha, 4f4h | https://www.cell.com/structure/fulltext/S0969-2126(24)00551-3 | Understanding the structural and functional diversity of ATP-PPases using protein domains and functional families in the CATH database | 2025 | J Yin, VP Waman, N Sen, M Firdaus-Raih, SD Lam- Structure, 2025 - cell.com | , 15 of them have experimentally determined structures available in the Protein DataBank ( PDB ).The remaining 20 FunFams did not have sufficient structural or sequence information to |
| 10 | 3h7f | - | https://link.springer.com/chapter/10.1007/978-3-030-18375-2_12 | Combinatorial Designing of Novel Lead Molecules Towards the Putative Drug Targets of Extreme Drug-Resistant Mycobacterium tuberculosis: A Future Insight for | 2019 | N Bachappanavar, S Skariyachan- Essentials of Bioinformatics, Volume II, 2019 - Springer | glyoxylate and dicarboxylate. The native structure of serine hydroxymethyltransferase ( PDB ID: 3H7F ) possessed two chains (A and B) with molecular weight of 95226.08 Da and a resolution of 1.5 (R-value free, 0.196) (Fig. 12.2a). Further |