We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 6AQ3 | 2017 | 0 |
| 8SQQ | 2023 | 0 |
| 6AQH | 2017 | 0 |
| 6AQY | 2017 | 0 |
| 8SQR | 2023 | 0 |
| 8SQT | 2023 | 0 |
| 8SU6 | 2023 | 0 |
| 6B8V | 2017 | 0 |
| 6BKV | 2017 | 0 |
| 8SWD | 2023 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 4wi1 | - | https://www.preprints.org/manuscript/202010.0576 | Phytochemical, biological and computational investigations of Erythrina fusca Lour. to assess antimalarial property against Plasmodium falciparum | 2020 | SA Sazed, O Islam, SL Bliese, MRH Hossainey - 2020 - preprints.org | All these sub structures impose a chemical structure that has a resemblance only with phaseolin Phaseolin) was subjected to molecular docking study against various proteins of Pf (4plz, 4qt2,4r1e, 4r6w, 4wi1 , 4zxg, 5e16, 5jaz, 5k8s, 5znc, 6aqs, 6ee4, 6fba and 6i4b pdb id |
| 2 | 3oc6 | - | https://chemrxiv.org/ndownloader/files/23930861 | BioMetAll: Identifying Metal-Binding Sites in Proteins from Backbone Preorganization | 2020 | JE Snchez-Aparicio, L Tiessler-Sala - 2020 - chemrxiv.org | Only 6- phosphogluconolactonase from mycobacterium smegmatis (which structure is accessible at the PDB with the code 3oc6 ) with an of BioMetAll in an artificial metalloenzyme framework, we started by looking for the His-His- Asp/Glu motif in the 6-PGLac structure |
| 3 | 3pk0 | 3rih | http://atrium.lib.uoguelph.ca/xmlui/handle/10214/16112 | Structural and functional characterization of the aminoacetone utilization microcompartment from Mycobacterium smegmatis MC2 155 | 2019 | E Mallette - 2019 - atrium.lib.uoguelph.ca | P)(H) - nicotninamide adenine dinucleotide (phosphate)(reduced) NTP - nucleotide triphosphate PDB - protein data bank (protein structure archive) PDU 1.2.1 Superstructure Architecture Microcompartments were first visualized in electron micrographs of carboxysome |
| 4 | 7luy | 6wct | https://www.nature.com/articles/s41467-025-61732-y | Comprehensive profiling of the catalytic conformations of human Guanylate kinase | 2025 | L Wang, Z Li, Y Xuan, J Qin, S Li, F Zhong- Nature, 2025 - nature.com | The atomic coordinates and structure factors for GMPK in its free form and substrate-bound forms generated in this study were deposited to the Protein Data Bank ( PDB ) ... The source data underlying Figs. 1i, 2c, 3i and Supplementary Fig. 6c–i, 9a–d, 11e are provided as a Source Data file. Previously published data for crystal structures of GMPK are available with PDB accession codes: 1EX6, 1EX7, 1LVG, 1S4Q, 1S96, 1ZNX, 1ZNW, 1GKY, 2ANB, 2ANC, 2QOR, 3TR0, 6WCT, 7LUY, 8PTS. |
| 5 | 3tmg | - | http://www.mdpi.com/2073-4352/3/2/306 | Glycine Betaine Recognition through Cation-PI Interactions in Crystal Structures of Glycine Betaine Complexes with C-Ethyl-pyrogallol [4] arene and C-Ethyl-resorcin [4]arene as Receptors | 2013 | I Fujisawa, K Aoki - Crystals, 2013 - mdpi.com | ... 18. Gardberg, A.; Fox, D.; Staker, B.; Stewart, L. Crystal Structure Of Glycine Betaine, L-Proline ABC Transporter, Glycine/Betaine/L-Proline-Binding Protein (ProX) from Borrelia Burgdorferi;PDB (Protein Data Bank): Upton, NY, USA, 2013; No. 3TMG. 19. ... |
| 6 | 7ral | - | https://www.science.org/doi/abs/10.1126/scitranslmed.adn5651 | Nonstabilized SARS-CoV-2 spike mRNA vaccination induces broadly neutralizing antibodies in nonhuman primates | 2025 | RD Malewana, V Stalls, A May, X Lu- Science Translational, 2025 - science.org | Our structural studies identified the DH1193 epitope as one of these conserved epitopes on accession numbers 8DPZ, 8DTK, and 7RAL in the PDB . Biospecimens, proteins, DNA, and |
| 7 | 4djt | - | https://academic.oup.com/nar/advance-article-abstract/doi/10.1093/nar/gkz478/549... | PatchSearch: a web server for off-target protein identification | 2019 | J Rey, I Rasolohery, P Tuffry, F Guyon- Nucleic acids, 2019 - academic.oup.com | 4djt 22.3 0.376 positive 10.378 The patch was extracted around ADP in the 1lkx myosin structure . Structural similarities between the patch and the entire surface of 40 PDB structures known to be able to interact, ie 'positive', or not, 'negative', with ADP or similar ligands |
| 8 | 4lfy | - | http://www.ingentaconnect.com/contentone/ben/cchts/2017/00000020/00000006/art000... | Targeting Pyrimidine Pathway of Plasmodium knowlesi: New Strategies Towards Identification of Novel Antimalarial Chemotherapeutic Agents | 2017 | M Rashmi, MK Yadav, D Swati- Combinatorial chemistry & high, 2017 - ingentaconnect.com | The structural quality factors and overall Z-scores of simulated PkDHOase structure were found within the valid limits, and thus may be used for drug design purposes Organism Query Coverage (%) Identity (%) PDB ID Burkholderia cenocepacia J2315 96 32 4LFY |
| 9 | 3qdf | 3r6o, 3rr6 | http://www.biochemj.org/bj/449/bj4490051.htm | Crystal structures of Cg1458 reveal a catalytic lid domain and a common catalytic mechanism for the FAH family | 2013 | R Tingting, G Yanyan, M May, Z Wenjun? - Biochemical Journal, 2013 - biochemj.org | ... Source/description, PDB ID, Resolution (?), Sequence identity (%), Aligned residues, Backbone RMSD (?). C. glutamicum/Cg1458, 4DBF, 1.90, ?, ?, ?. 4DBH, 2.00, ?, ?, ?. Mycobacterium marinum M/MMAR-1718, 3QDF, 2.05, 56.73, 245, 1.11. ... |
| 10 | 3ng3 | - | http://link.springer.com/article/10.1007/s12275-016-6029-4 | Structural insight for substrate tolerance to 2-deoxyribose-5-phosphate aldolase from the pathogen Streptococcus suis | 2016 | TP Cao, JS Kim, MH Woo, JM Choi, Y Jun, KH Lee - Journal of , 2016 - Springer | ... avium DERA (MaDERA, PDB code: 3NG3) as a search mo- del (Baugh et al., 2015)using the CCP4i program MOLREP (Vagin and Teplyakov, 2010). The FL-SsDERAstructure was used as a search model for SL-SsDERA. ... |