We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 6O3F | 2019 | 0 |
| 6O4N | 2019 | 0 |
| 6OE6 | 2019 | 0 |
| 6OHZ | 2019 | 0 |
| 6OKH | 2019 | 0 |
| 6ONN | 2019 | 0 |
| 6OR9 | 2019 | 0 |
| 6OTJ | 2019 | 0 |
| 6PI4 | 2019 | 0 |
| 6Q10 | 2019 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3r1i | - | http://www.jbc.org/content/early/2019/06/17/jbc.RA119.009390.short | Structural and biochemical characterization of 20-hydroxysteroid dehydrogenase from Bifidobacterium adolescentis strain L2-32 | 2019 | HL Doden, RM Pollet, SM Mythen, Z Wawrzak- Journal of Biological, 2019 - ASBMB | replacement with the structure of an SDR from Mycobacterium marinum ( PDB : 3R1I ) and refined indicate these alanine substitutions did not sig- nificantly affect secondary structural elements (Fig extended N-terminus is important for second- ary and quaternary structure In both |
| 2 | 5umh | - | https://scholarcommons.sc.edu/etd/4126/ | Structural and Functional Studies of Proteins from the Agricultural Pests Tetranychus Urticae and Aspergillus Fumigatus | 2017 | C Schlachter - 2017 - scholarcommons.sc.edu | Structural homologs of TuDioxygenase identified by the Dali server [51] were dioxygenases such as: SACTE_2871 (PDB code 4ILT, 153/155 residues aligned, RMSD 1.8 Å); catechol 1,2-dioxygenase from Burkholderia multivorans (PDB code 5UMH, 167/307 residues aligned |
| 3 | 3tf6 | - | http://itempdf74155353254prod.s3.amazonaws.com/6159143/DLSCORE__A_Deep_Learning_... | DLSCORE: A Deep Learning Model for Predicting Protein-Ligand Binding Affinities | 2018 | M Hassan, DC Mogollon, O Fuentes, S Sirimulla - 2018 - .s3.amazonaws.com | In designing DLSCORE architecture , we divided the entire method into two parts 2 PDB IDs 4rqv, 4tkb, 1met, 5c5t, 3p8p, 2iuz, 4kfq, 3ifl, 4p6c, 1oyt, 4ibg, 3uri, 3t01, 1o5e, 3qgy, 3kgu, 2h21, 3agl, 3n7a, 1qkt, 1o2j, 1azm, 1afk, 1g54, 3nu3, 2yhw, 4mme, 2f94, 3vha, 3tf6 , 2pvj, 1fkb |
| 4 | 3rqi | - | http://docserv.uni-duesseldorf.de/servlets/DerivateServlet/Derivate-23211/Disser... | Molekulare Charakterisierung der Interaktion der Sensorkinase ETR1 aus Arabidopsis thaliana mit nachgeschalteten Komponenten des Ethylensignalwegs | 2012 | B Scharein - 2012 - docserv.uni-duesseldorf.de | ...Die strukturelle Information für Phospho‐Aspartat stammen aus dem Antwort Regulator Protein aus Burkholderia pseudomallei (pdb‐code 3RQI) ... |
| 5 | 4f4h | - | http://acervodigital.ufpr.br/handle/1884/43806 | Caracterizao de enzima nad sintetase (NADE2) de herbaspirillum seropedicae | 2016 | ARS Santos - 2016 - acervodigital.ufpr.br | ... Outras NAD sintetases de procariotos com domínio glutaminase como a de Cytophaga hutchinsonii (número PDB 3ILV) e Burkholderia thailandensis (número PDB 4F4H), possuem estruturas cristalinas determinadas e depositadas no banco de dados PDB. ... |
| 6 | 4jpd | - | http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0184961 | SAXS and stability studies of iron-induced oligomers of bacterial frataxin CyaY | 2017 | M Fekry, W Alshokry, P Grela, M Tchrzewski- PloS one, 2017 - journals.plos.org | ... The crystal structure of the CyaY monomer ( PDB entry 1EW4) was used for building a model, which was assumed to be a ... The ratio between the emission intensities at 350 nm and 330 nm (F350/F330) was used to track the structural changes with increasing temperature. ... |
| 7 | 3r7k | - | http://journals.iucr.org/d/issues/2015/04/00/mh5170/mh5170bdy.html | A covalent adduct of MbtN, an acyl-ACP dehydrogenase from Mycobacterium tuberculosis, reveals an unusual acyl-binding pocket | 2015 | AF Chai, EMM Bulloch, GL Evans, JS Lott… - Acta Cryst. (2015). D71, 862-872 …, 2015 - journals.iucr.org | ... 2.10.0. Cambridge: Global Phasing Ltd.] ) alternating with manual rebuilding of the molecularstructure using Coot ... Protein, PDB code, C9-N10-N5-C4 (°), Distortion (°), Reference. ... Acyl-CoAdehydrogenase, 3r7k, 157.7, 22.3, Seattle Structural Genomics Center for Infectious Disease ... |
| 8 | 4o2d | - | http://dx.plos.org/10.1371/journal.pone.0113568.g009 | Biochemical and Structural Characterization of Mycobacterial Aspartyl-tRNA Synthetase AspS, a Promising TB Drug Target | 2014 | SS Gurcha, V Usha, JAG Cox, K Fütterer, KA Abrahams… - PloS one, 2014 - dx.plos.org | ... The corresponding loop in E. coli AspRS is 11 amino acid residues shorter (Figure 7). Anapo-structure of Ms-AspS has recently been deposited in the PDB (entry 4O2D), in which thisloop assumes a very different conformation, forming a 2-turn α-helix and folding back ... |
| 9 | 4ex4 | - | http://pubs.acs.org/doi/abs/10.1021/acs.biochem.7b00852 | Structural and Functional Characterization of Malate Synthase G from Opportunistic Pathogen Pseudomonas aeruginosa | 2017 | AC McVey, P Medarametla, X Chee, S Bartlett- Biochemistry, 2017 - ACS Publications | ... G. Inactivation of these enzymes has been reported to abolish the ability of P. aeruginosa to establish infection in a mammalian model system, yet we still lack the structural information to support drug design efforts. In this work, we describe the first X-ray crystal structure of P ... |
| 10 | 6x79 | - | https://www.sciencedirect.com/science/article/pii/S0141813021015956 | Chitosan derivatives: A suggestive evaluation for novel inhibitor discovery against wild type and variants of SARS-CoV-2 virus | 2021 | C Modak, A Jha, N Sharma, A Kumar- International Journal of Biological, 2021 - Elsevier | of efficacious treatment strategies to robustly tackle this pandemic by targeting various pathways and mechanisms of infection by either creating new drug molecules or repurpose already existing drug molecules for impacting virus infection cycle or structural proteins [2] ... For heparan sulfate proteoglycan/heparin-binding site as target site, the homotrimerectodomain in prefusion state of S-glycoprotein PDB ID: 6X79 with a low resolution of 2.90 Å was considered |