We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 7TOT | 2022 | 0 |
| 7TN0 | 2022 | 0 |
| 7TMV | 2022 | 0 |
| 7TMG | 2022 | 0 |
| 7TMF | 2022 | 0 |
| 7TMD | 2022 | 0 |
| 4HDT | 2012 | 0 |
| 4H3Y | 2012 | 0 |
| 9ZM4 | 2025 | 0 |
| 4FK8 | 2012 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3ng3 | - | http://link.springer.com/article/10.1007/s12275-016-6029-4 | Structural insight for substrate tolerance to 2-deoxyribose-5-phosphate aldolase from the pathogen Streptococcus suis | 2016 | TP Cao, JS Kim, MH Woo, JM Choi, Y Jun, KH Lee - Journal of , 2016 - Springer | ... avium DERA (MaDERA, PDB code: 3NG3) as a search mo- del (Baugh et al., 2015)using the CCP4i program MOLREP (Vagin and Teplyakov, 2010). The FL-SsDERAstructure was used as a search model for SL-SsDERA. ... |
| 2 | 3kw3 | - | https://www.biorxiv.org/content/early/2018/06/13/346130.abstract | Computational evidence of a new allosteric communication pathway between active sites and putative regulatory sites in the alanine racemase of Mycobacterium | 2018 | J Jyothikumar, S Chandani, R Tangirala- bioRxiv, 2018 - biorxiv.org | Fig 3 Structure -based multiple sequence alignment of alanine racemases E. coli ( PDB code: 2RJG), S. pneumoniae ( PDB code: 3S46), P. fluorescens ( PDB code: 2ODO), P. aeruginosa ( PDB code: 1RCQ), A. baumannii ( PDB code: 4QHR), B. henselae ( PDB code: 3KW3 ) |
| 3 | 3qh4 | - | http://scholarbank.nus.edu/handle/10635/37588 | Characterization of Mycobacterial Estrases/Lipases using combined Biochemical and Computational Enzymology | 2012 | A SHUKLA - 2012 - scholarbank.nus.edu | ... Page 12. 3 Lists of Abbreviations THL: Tetrahydrolipstatin pNP: para-nitrophenol PDB: ProteinData Bank PMSF: phenylmethanesulfonylfluoride E600: diethyl-p-nitrophenylphosphate EC : Enzyme classifier TAGs: Triacylglycerol MTB: Mycobacterium tuberculosis ... |
| 4 | 4noz | - | http://www.sciencedirect.com/science/article/pii/S2213231717301416 | Functional and evolutionary characterization of Ohr proteins in eukaryotes reveals many active homologs among pathogenic fungi | 2017 | DA Meireles, RM Domingos, JW Gaiarsa, EG Ragnoni - Redox biology, 2017 - Elsevier | ... (A) For Ohr, 4NOZ secondary structure from Burkholderia cenocepacia ... (C) Selected Ohr-likesequences deposited in PDB database were aligned with ... For Ohr-like, secondary structure 2PN2from Psychrobacter arcticus 273-4 (Pa_Ohr_like) was used to guide the alignment. ... |
| 5 | 3meq | - | http://d-nb.info/1035623692/34 | Reaction and protein engineering employing a carbonyl reductase from candida parapsilosis | 2012 | A Jakoblinnert, UDMB Ansorge-Schumacher - 2012 - d-nb.info | ... Four X-ray templates were selected for modeling the CPCR1 structure (349aa): Yeast ADH I from S. cerevisiae with bound trifluorethanol (347 residues with quality score 0.522, PDB ID 2HCY), ADH from Brucella melitensis (341 residues with quality score 0.590, PDB ID 3MEQ), ... |
| 6 | 3khw | - | http://repositorio.ufpa.br/jspui/handle/2011/6781 | Caracterização dos genes codificadores da hemaglutinina e PB2 do vírus Influenza A (H1N1) pandêmico isolado na mesorregião metropolitana de Belém | 2012 | JA FERREIRA - 2012 - repositorio.ufpa.br | ... LACEN Laboratório Central MDCK Cultura de células de rim canino (Madin Darbin Canine Kidney)Mrna Ácido ribonucléico mensageiro M631L Substituição no aminoácido 631 de uma metioninapor uma leucina OMS Organização Mundial da Saúde PDB Banco de dados de ... |
| 7 | 4ffc | - | http://5.63.15.51/bitstream/Hannan/136345/1/9781498717434.pdf | Polyamines in fungi | 2016 | J Ruiz-Herrera - 2016 - 5.63.15.51 | ... come from such different sources and have in common only their chemical similarities: Polyaminealiphatic molecules (see their structures in Figure ... Figure 3.15 structure of a 4-aminobutyrate aminotransferase (GabT) from Mycobacterium abscessus, 4FFC (Baugh, l., Phan, i., Begley, D.W., Clifton, m.c., Armour ... |
| 8 | 3kw3 | - | http://ir.inflibnet.ac.in:8080/jspui/handle/10603/67480 | Computational approach on drug targeted proteins in streptococcus pneumoniae Molecular modelling inhibitor design and docking studies | 2016 | TM Reddy - 2016 - ir.inflibnet.ac.in | ... Sequence alignment of Sp-AIr model with crystal structure alanine racemase (1SFT) based onsequence ... Air, indicates it closely related with 1SFT compare with other PDB's (2SFP, ... 2DY3 Air,1 SFT 2SFP 1EPV 1XQK 3HA1 2VD9 2VD8 3HUR ----- 3COS 3KW3 1RCQ 20D0 I ... |
| 9 | 6tys | - | https://repositorio.ufopa.edu.br/jspui/handle/123456789/332 | Planejamento de protenas imunognicas multi-eptopo visando o desenvolvimento de uma vacina de nova gerao para a infeco do vrus Nipah | 2020 | JMP GALCIO - 2020 - repositorio.ufopa.edu.br | -defensin adjuvants were also added to the structural models to increase immunogenicity The interactions between each predicted epitope and MHC-I and MHC- II structures were also analyzed, using molecular modeling P Fosfoprotena PDB Protein Data Bank |
| 10 | 3swt | - | https://rc.library.uta.edu/uta-ir/handle/10106/29306 | Non-Heme Iron Oxygenases: An Investigation of the Protein Ligand Effects on the Chemical Reactivity in MiaE and Cysteamine Dioxygenases | 2019 | P Palacios - 2019 - rc.library.uta.edu | enzyme toluene monooxygenase in Figure 1.1 (panel B).14 The structural frame of the non-heme iron Figure 1.2 X-ray crystal structure of the Fe(II)/-ketoglutarate dependent enzyme TauD from Myobacterium marinum ( PDB : 3SWT )22 Page 22. 10 |