We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 3UK2 | 2011 | 0 |
| 9ZMU | 2025 | 0 |
| 3TZU | 2011 | 0 |
| 3TRR | 2011 | 0 |
| 3TLF | 2011 | 0 |
| 3T5S | 2011 | 0 |
| 7TMB | 2022 | 0 |
| 7TM9 | 2022 | 0 |
| 9ZMV | 2025 | 0 |
| 9ZMW | 2025 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 6bfu | - | https://pmc.ncbi.nlm.nih.gov/articles/PMC11014491/ | Broadly neutralizing antibodies against emerging delta-coronaviruses | 2024 | M Rexhepaj, YJ Park, L Perruzza, D Asarnow- , 2024 - pmc.ncbi.nlm.nih.gov | E, Superimposition of the PD33-bound PDCoV RBD structure with the PDCoV S ectodomain trimer structure ( PDB 6BFU ) 35 showing that PD33 could not bind to a closed S trimer due |
| 2 | 5vwm | - | https://pdfs.semanticscholar.org/1774/b2148932698ea43fe239489547556ff273f3.pdf | In silico study of various compounds from essential oil of Cymbopogon winterianus against Pseudomonas aeruginosa targets | 2019 | Moura, A Monteiro, M Maia, N Sousa, G Rodrigues - 2019 - pdfs.semanticscholar.org | Protein resolution values were 2.1 for ExoA ( PDB ID 1XK9), 1.8 for LpxC ( PDB ID 5VWM ) and 2.31 for PBP3 ( PDB ID 4KQO). All presented inhibitors coupled to their crystallographic structure , which allowed the delimitation of the active site of each protein |
| 3 | 3fvb | - | http://dr.library.brocku.ca/handle/10464/5755 | Towards reverse engineering of Photosystem II: Synergistic Computational and Experimental Approaches | 2014 | A Mahboob - 2014 - dr.library.brocku.ca | ... 62 3.4.3. Comparison of water channels found in this work to channelsobtained from static structures ..... ... 19 Figure 1.2 Structure of PSII dimershowing subunits CP47,D1,D2,cyt b559,CP43,cyt c550 ... |
| 4 | 3lls | - | http://www.biochemj.org/bj/450/bj4500127.htm | Crystal structure of hexanoyl-CoA bound to beta-ketoacyl reductase FabG4 of Mycobacterium tuberculosis | 2013 | D Debajyoti, B Sudipta, R Amlan, B Rupam? - Biochemical Journal, 2013 - biochemj.org | ... The structure of the FabG4?NADH complex was determined by molecular replacement in MOLREP [21] using a monomer of the apoFabG4 structure (PDB code 3LLS). ... MtFabG1 (MabA;PDB code 1UZM) and FabG4 (PDB codes 3LLS and 3Q6I) were chosen as the receptor. ... |
| 5 | 2kok | - | http://acervodigital.ufpr.br/handle/1884/41354 | Desenvolvimento de ProClaT, uma ferramenta computacional para a classificao de protenas: o caso DraB de Azospirillum brasiliense | 2010 | ET Rubel - 2010 - acervodigital.ufpr.br | ... ORF Open Reading Frame PDB Protein Data Bank ProClaT Protein Classifier Tool RNA cidoribonucleico ... A MOLECULA FOI CRIADA COM A FERRAMENTA JMOL, UTILIZANDO O ARQUIVOPDB RETIRADO DO RCSB PDB (IDENTIFICAO DA ESTRUTURA: 4WZB). ... |
| 6 | 4o3v | 4nhf, 4lso, 4kz1 | http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4840375/ | VirB8-like protein TraH is crucial for DNA transfer in Enterococcus faecalis | 2016 | C Fercher, I Probst, V Kohler - Scientific , 2016 - ncbi.nlm.nih.gov | ... A structure-based homology search revealed that TraH is related to proteins of the VirB8 family,which all exhibit a ... PDB code 4NHF, 14% sequence identity), Bartonella quintana (PDB code 4LSO,6% sequence identity), Rickettsia typhi (PDB code 4O3V, 19% sequence ... |
| 7 | 5dd7 | - | https://repository.up.ac.za/handle/2263/77810 | Structural and inhibition studies of thiamine monosphosphate kinase from Mycobacterium tuberculosis | 2020 | LS Dlamini - 2020 - repository.up.ac.za | OT Oxythiamine PDB Protein data bank 38 Figure 3.5: Crystal structure of MtbThiL homodimer ..... 40 bind to both free enzyme and the ES complex. Detailed structural information particularly high resolution crystal structures of substrate |
| 8 | 3men | - | https://www.degruyter.com/view/j/psr.2019.4.issue-10/psr-2019-0066/psr-2019-0066... | Combined approach of homology modeling, molecular dynamics, and docking: computer-aided drug discovery | 2019 | V Chahal, S Nirwan, R Kakkar- Physical Sciences Reviews, 2019 - degruyter.com | Figure 2: Steps involved in homology modeling for 3D structure prediction sequences of proteins with known 3D structures available in various depositories such as PDB , using the In some cases, a single template is not enough to provide the complete structural information ... This catalytic domain was modeled using the I-TASSER server [98] by exploiting the solved crystal structures of some HDAC proteins having structural identities (2VCG (37%), 1ZZ0 (37%), 1C3P (29%), 3MEN (36%), 3COY (47%), |
| 9 | 3l56 | - | http://uhra.herts.ac.uk/handle/2299/19623 | Evolutionary targeted discovery of influenza A virus replication inhibitors | 2018 | H Patel - 2018 - uhra.herts.ac.uk | 4.4.2 Structure and predicted binding site locations of the NEP NCI National cancer institute NEP Nuclear export protein NLS Nuclear localisation signal NS1 Non- structural protein 1 basic protein 1 PB2 Polymerase basic protein 2 PBS Phosphate buffer saline PDB Protein data |
| 10 | 3tmg | - | https://www.frontiersin.org/articles/10.3389/fmicb.2018.02536/abstract | The GbsR family of transcriptional regulators: functional characterization of the OpuAR repressor | 2018 | E Bremer, S Ronzheimer, B Warmbold- Frontiers in, 2018 - frontiersin.org | the linker region, an aromatic cage is predicted as the inducer-binding site, whose envisioned architecture resembles that subtilis GbsR protein (Nau-Wagner et al., 2012); it is based on the crystal structure of the DNA-binding protein Mj223 of M. jannaschii ( PDB entry 1KU9 |