We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 7MI0 | 2021 | 0 |
| 7MIW | 2021 | 0 |
| 7MYQ | 2021 | 0 |
| 7MYS | 2021 | 0 |
| 7N1L | 2021 | 0 |
| 7T7J | 2022 | 0 |
| 7RCR | 2021 | 0 |
| 7RHE | 2021 | 0 |
| 7RZO | 2021 | 0 |
| 7S5E | 2021 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 4i1v | 4i1u | http://www.sciencedirect.com/science/article/pii/S1047847714002172 | Crystal structure of Legionella pneumophila dephospho-CoA kinase reveals a non-canonical conformation of P-loop | 2014 | X Gong, X Chen, D Yu, N Zhang, Z Zhu, L Niu… - Journal of structural …, 2014 - Elsevier | ... The first DPCK crystal structure was solved and reported from Haemophilus influenzae (HiDPCK,PDB code 1jjv ( Obmolova et al ... DPCK structures are also available in the PDB, such asBurkholderia vietnamiensis DPCK (BvDPCK, PDB codes 4i1u, 4i1v, Seattle Structural ... |
| 2 | 5v6d | - | https://papers.ssrn.com/sol3/papers.cfm?abstract_id=3188389 | A Centipede Toxin Family Defines a New Ancient Class of CS Defensins | 2018 | TS Dash, T Shafee, PJ Harvey, C Zhang- Available at SSRN, 2018 - papers.ssrn.com | structure of Sm2 against all structures of proteins contained within the Protein Data Bank ( PDB ) that are composed of more than 30 amino acids Thus, the minimal cysteine motif is by itself sufficient to generate a stable CS structure . Although the 2ds-CS architecture has |
| 3 | 5tw7 | - | https://www.biorxiv.org/content/10.1101/808618v2.full-text | Helices on interdomain interface couple catalysis in the ATPPase domain with allostery in Plasmodium falciparum GMP synthetase | 2020 | S Shivakumaraswamy, N Pandey, L Ballut, S Violot- bioRxiv, 2020 - biorxiv.org | Experimental Procedures. Sequence and structure analysis The PDB IDs of the structures of GMPS analyzed are 1GPM (Escherichia coli), 3TQI (Coxiella burnetii), 2YWB and 2YWC (Thermus thermophilus), 5TW7 (Neisseria gonorrhoeae), 2VXO (Homo sapiens), 3UOW |
| 4 | 3ijp | 4f3y | http://scripts.iucr.org/cgi-bin/paper?pu5392 | Cloning, expression, crystallization and preliminary structural studies of dihydrodipicolinate reductase from Acinetobacter baumannii | 2013 | S Kaushik, A Singh, M Sinha, P Kaur? - Acta Crystallographica Section F Structural Biology and Crystallization Communications, 2013 - scripts.iucr.org | ... 143, 617-623.] ), Bartonella henselae (BhDHDPR; PDB entry 3ijp ; Seattle Structural Genomics Center for Infectious Disease, unpublished work), Burkholderia thailandensis (BtDHDPR; PDB entry 4f3y ; Seattle Structural Genomics Center for Infectious Disease, unpublished ... |
| 5 | 6q06 | - | https://www.biorxiv.org/content/10.1101/2021.04.14.439284v1.abstract | Cryptic SARS-CoV2-spike-with-sugar interactions revealed by'universal'saturation transfer analysis | 2021 | CJ Buchanan, B Gaunt, PJ Harrison, A Le Bas, A Khan- bioRxiv, 2021 - biorxiv.org | computational modelling environments provide exact structural models. In this way, uSTA analysis provides an automated pipeline from raw NMR free induction decay (FID) signals all the way to proteinligand structures in a freely available form for the non-expert |
| 6 | 3meq | - | http://onlinelibrary.wiley.com/doi/10.1111/j.1365-2958.2011.07914.x/full | Furfural reduction mechanism of a zinc-dependent alcohol dehydrogenase from Cupriavidus necator JMP134 | 2012 | CH Kang, R Hayes, EJ Sanchez, BN Webb? - Molecular Microbiology, 2012 - Wiley Online Library | ... through the coordinates of ADH from Brucella melitensis (3MEQ). Iterative model building and refinement took place using the programs coot (Emsley et al., 2010) and phenix (Adams et al., 2010). All FurX coordinates have been deposited in the Protein Data Bank: 3S1L (apo ... |
| 7 | 4g7f | - | http://pubs.rsc.org/-/content/articlehtml/2017/mb/c7mb00252a | Insights into the Giardia intestinalis enolase and human plasminogen interaction | 2017 | R Aguayo-Ortiz, P Meza-Cervantez, R Castillo- Molecular, 2017 - pubs.rsc.org | ... P-BLAST analysis showed that T. brucei brucei ( PDB ID: 2PU1) and T. cruzi ( PDB ID: 4G7F ) exhibited the highest ... (B) Sequence alignment of the proposed HsPLG binding sites (highlighted in orange boxes) in the different organisms, (C) 3D structure superposition and ... |
| 8 | 3knu | - | http://scholarscompass.vcu.edu/etd/2725/?show=full | Dynamics of substrate interactions in tRNA (m1G37) methyltransferase: Implications for drug discovery | 2012 | MK Palesis - 2012 - scholarscompass.vcu.edu | ... The secondary structure of specific sequences is illustrated above the alignment. ... Page 29. 9 Figure6. Structural alignment of TrmD from different bacterial species: Anaplasma phagocytophilum(royal blue, PDB ID: 3KNU), Bartonella henselae (cyan, PDB ID: 31EF ... |
| 9 | 5eo6 | - | https://scholarworks.montana.edu/xmlui/handle/1/14685 | A molecular, structural, and cellular multiple-level study aimed at understanding the unique reaction catalyzed by the last enzyme in the heme-biosynthesis pathway of | 2018 | AI Celis Luna - 2018 - scholarworks.montana.edu | Overlay of the structures of a representative heme b-bound chlorite dismutase and solvent This research aimed to understand ChdC function at the molecular, structural , and cellular levels The coproheme-bound ChdC structure revealed a helical-loop that is flexible and moves |
| 10 | 6mg6 | - | https://www.researchsquare.com/article/rs-561386/latest.pdf | Genome Mining, Phylogenetic and Structural Analysis of Bacterial Nitrilases for the Biodegradation of Nitrile Compounds | 2021 | R Salwan, V Sharma, S Das - 2021 - researchsquare.com | ( PDB :1EMS), Helicobacter pylori ( PDB : 6MG6 ), Mus musculus ( PDB : 2W1V), Pyrococcus abyssi ( PDB : 3WUY) has already been reported. However, with most of the nitrilases, the crystal structure had been resolved, came |