We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 8D2Z | 2023 | 0 |
| 8D57 | 2022 | 0 |
| 7TXX | 2022 | 0 |
| 8DF5 | 2022 | 0 |
| 7TWZ | 2022 | 0 |
| 4POB | 2014 | 0 |
| 4PPW | 2014 | 0 |
| 8DGD | 2023 | 0 |
| 8DIM | 2022 | 0 |
| 7TOT | 2022 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 5idw | - | http://onlinelibrary.wiley.com/doi/10.1002/1873-3468.12683/full | Structure and characterization of a NAD (P) Hdependent carbonyl reductase from Pseudomonas aeruginosa PAO1 | 2017 | S Li, X Teng, L Su, G Mao, Y Xu, T Li, R Liu - FEBS , 2017 - Wiley Online Library | ... monomer contains a large central -sheet of seven -strands that is flanked by three -helices on one side and four -helices on the other, forming a sandwich structure (Fig. ... The closest homologue is the Burkholderia vietnamiensis oxidoreductase ( PDB ID: 5IDW ; Z score 27.2 ... |
| 2 | 6bfu | - | https://journals.asm.org/doi/abs/10.1128/JVI.02284-20 | Insight into Vaccine Development for Alphacoronaviruses Based on Structural and Immunological Analyses of Spike Proteins | 2021 | Y Shi, J Shi, L Sun, Y Tan, G Wang, F Guo- Journal of, 2021 - Am Soc Microbiol | (B) Overall structure comparison of coronavirus S-trimers. The S-trimer structures of HCoV-229E ( PDB ID: 6U7H), HCoV-NL63 ( PDB ID: 5SZS), PEDV ( PDB ID: 6U7K), FIPV ( PDB ID: 6JX7), PDCoV ( PDB ID: 6BFU ), IBV ( PDB ID: 6CV0), SARS-CoV ( PDB ID: 5X5B), SARS |
| 3 | 3ek2 | - | http://www.mdpi.com/1422-0067/15/2/2672/pdf | Paclitaxel Induces Apoptosis in Breast Cancer Cells through Different Calcium-Regulating Mechanisms Depending on External Calcium Conditions | 2014 | Z Pan, A Avila, L Gollahon - International journal of molecular sciences, 2014 - mdpi.com | ... 3 2i6x ?10.3 Porphyromonas gingivalis hydrolase 4 3ek2 ?10.3 Burkholderia pseudomallei eonyl reductase ... Two libraries, ?pdb_subset.py? and ?pdb_centermass.py? from the pdb-tools project (https://code.google.com/p/pdb-tools/) were modified and used in Artemis. ... |
| 4 | 5ids | - | http://digitalcommons.augustana.edu/biolmruber/28/ | Mrub_2052, Mrub_0628, and Mrub_2034 genes are predicted to be orthologous to b0688, b2039, and b3789 genes found in Escherichia coli, which are involved in | 2017 | JP Hartnett, D Scott - 2017 - digitalcommons.augustana.edu | ... (Finn et al.). Protein Data Bank ( PDB ) (Berman et. al., 2000) is a curated collection of crystalized proteins.If a PDB hit is obtained for a query sequence, then 3-D structure neighbors, Page 7. 6 ... PDB protein database 5IDS Glucose-1-phosphate Thymidylyltransferase ... |
| 5 | 3oa1 | - | http://smbb.com.mx/congresos%20smbb/guadalajara15/PDF/XVI/trabajos/VIII/VIIIC-27... | Modelado del Monómero de la Fosfoproteína del Virus de la Rabia | 2015 | EMD González, FGB González, JC Basurto… - smbb.com.mx | ... PDB ID Description 1VY1 Dominio del C-Terminal de la polimerasa del virus de la rabia 3OA1Cristal de ... IPN – ESM Bibliografía. 1. Ivanov , I., Crépin, T., Jamin, M., & Ruigrok, RH (10 de Enerode 2010). Structure of the Dimeration Domain of the Rabies Virus Phosphoprotein. ... |
| 6 | 5unb | - | https://www.biorxiv.org/content/early/2018/11/06/463554.abstract | NEPRE: a Scoring Function for Protein Structures based on Neighbourhood Preference | 2018 | S Liu, X Xiang- bioRxiv, 2018 - biorxiv.org | Based on the testing results and the comparison with several other structure assessment methods, we report that the neighborhood structural correctness. MATERIALS AND METHODS composed of 14,647 PDB structures , which were selected from the NCBI VAST (the vector |
| 7 | 6ao8 | - | https://aac.asm.org/content/64/6/e02252-19.abstract | Mutations in ArgS Arginine-tRNA Synthetase Confer Additional Antibiotic Tolerance Protection to Extended-Spectrum--Lactamase-Producing Burkholderia | 2020 | H Yi, J Park, KH Cho, HS Kim- Antimicrobial Agents and, 2020 - Am Soc Microbiol | To investigate the ArgS function affected by the mutations, we first computationally predicted the B. thailandensis ArgS structure by using the homologous structure of Neisseria gonorrhoeae (PDB accession no. 6AO8) using Modeller |
| 8 | 4g7f | - | http://www.academiajournals.com/s/6-Tesis-Gutierrez-Soto-Montserrat.pdf | HUMANIDADES, CIENCIA, TECNOLOGA E INNOVACIN EN PUEBLA | 2020 | MG SOTO, C SUBCUTNEA - academiajournals.com | Agarosa NTD Enfermedades Tropicales Desatendidas OMS Organizacin Mundial de la Salud ONU Organizacin de las Naciones Unidas OPS Organizacin Panamericana de la Salud PBS Buffer salino de fosfatos PBS-T Buffer salino de fosfatos-Tween 20 PDB Banco de |
| 9 | 4qhq | - | https://thesis.library.caltech.edu/10840/ | Structural and Functional Characterization of the Escherichia coli MetNI Methionine Transporter | 2018 | PT Nguyen - 2018 - thesis.library.caltech.edu | PTN participated in soaking experiments for the L-semethionine-bound MetNI structure ( PDB :3TUZ) and manuscript preparation. Page 12. xii transporter architecture and mechanism. Science 16. Oldham ML, Khare D, Quiocho FA, Davidson AL, Chen J. Crystal structure of a |
| 10 | 3meq | - | http://www.redalyc.org/pdf/620/62049878004.pdf | ENZYMATIC REDUCTION BY ALCOHOL DEHYDROGENASE TA1316 FROM Thermoplasma acidophilum | 2017 | M Guzmn-Rondrguez, L Santos - Revista Mexicana de Ingeniera , 2017 - redalyc.org | ... 3MEQ Brucella melitensis ADH Tetramer Zn +2 , Cl, Na + 0.930 To be published 1R37 Sulfolobussolfataricus ADH Tetramer Zn +2 0.929 (Esposito et al. 2003) ... Structural analyses displayed by thePDB platform showed the crystal structure of Pyrobaculum aerophilum ... |