We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 7TWZ | 2022 | 0 |
| 7TOT | 2022 | 0 |
| 8DIS | 2023 | 0 |
| 8DIU | 2022 | 0 |
| 8DOF | 2022 | 0 |
| 8DOP | 2022 | 0 |
| 4U83 | 2014 | 0 |
| 7TN0 | 2022 | 0 |
| 4W9U | 2014 | 0 |
| 8DOQ | 2022 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3r1i | - | http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3867646/ | Insilico Characterization and Homology Modeling of Arabitol Dehydrogenase (ArDH) from Candida albican | 2013 | MW Sarwar, IB Saleem, A Ali, F Abbas - Bioinformation, 2013 - ncbi.nlm.nih.gov | … used for multiple sequence alignment of ArDH with other dehydrogenases from Mycobacterium marinum (PDB Id: 3R1I), Candida parapsilosis ... |
| 2 | 3k9w | 3pxu | https://indigo.lib.uic.edu/handle/10027/9998 | Characterization of Phosphopantetheine Adenylyltransferase: A Potential, Novel, Antibacterial Target | 2013 | T Wubben - 2013 - indigo.lib.uic.edu | ... PDB Protein Data Bank PEG polyethylene glycol PhP 4'-phosphopantetheine Pi orthophosphate ...root mean standard deviation rpm revolutions per minute SAR structure-activity relationship ...thermodynamic, and structural characterization of M.tuberculosis and B.anthracis PPAT ... |
| 3 | 3iml | - | http://31.24.0.66/bj/452/bj4520027add.pdf | Insight into S-adenosylmethionine biosynthesis from the crystal structures of the human methionine adenosyltransferase catalytic and regulatory subunits | 2013 | N SHAFQAT, JRC MUNIZ, ES PILKA? - Biochem. J, 2013 - 31.24.0.66 | ... sequences include hMAT1A (PDB code 2OBV; Uniprot ID Q00266), hMAT2A (PDB code 2P02; Uniprot ID P31153), rMAT1A (PDB code 1O9T; Uniprot ID P13444), eMAT (PDB code 1RG; Uniprot ID P0A817) and Burkholderia pseudomallei MAT (PDB code 3IML; Uniprot ID ... |
| 4 | 3mmt | - | http://link.springer.com/article/10.1007/s11084-013-9331-8 | Uniquely Localized Intra-Molecular Amino Acid Concentrations at the Glycolytic Enzyme Catalytic/Active Centers of Archaea, Bacteria and Eukaryota are Associated with Their Proposed Temporal Appearances on Earth | 2013 | JD Pollack, D Gerard, DK Pearl - Origins of Life and Evolution of Biospheres, 2013 - Springer | ... We thank A. S. Gardberg, Emerald BioStructures, Seattle, WA for advice concerning the composition of the C/AC of PDB 3mmt FBPA of Bartonella henselae. ... |
| 5 | 4fur | - | http://bioinformatics.oxfordjournals.org/content/early/2016/03/28/bioinformatics... | Tally: a scoring tool for boundary determination between repetitive and non-repetitive protein sequences | 2016 | FD Richard, R Alves, AV Kajava - Bioinformatics, 2016 - Oxford Univ Press | ... Examples of proteins where TRs found in sequence either correspond to (A) presence (PDBcode 3VN3 (Kondo et al., 2011)) or (B) absence (4FUR) of TRs ... both in sequence and in structure(TR-SS) and 'false' TRs only found in sequence but not in the structure (TR-SNS ... |
| 6 | 4j07 | - | http://informahealthcare.com/doi/abs/10.1517/17460441.2013.826188 | The eradication of leprosy: molecular modeling techniques for novel drug discovery | 2013 | S Anusuya, J Natarajan - Expert opinion on drug discovery, 2013 - informahealthcare.com | ... M. leprae (Table 1) were elucidated using X-ray diffraction methods and were deposited in ProteinData Bank (PDB). ... In case of the structure of riboflavin synthase (PDB ID: 4JO7), the resolution is 1.95 ? which ... Table 2. Results of Ramachandran plot analysis for 1BVS and 4J07. ... |
| 7 | 4kzk | - | https://www.preprints.org/manuscript/201909.0313 | Structural Flexibility of Peripheral Loops and Extended C-Term Domain of Short Length Substrate Binding Protein from Rhodothermus marinus | 2019 | JE Bae, IJ Kim, Y Xu, KH Nam - 2019 - preprints.org | 120 analysis and substrate docking studies using previously reported crystal structure of SBP ( PDB 121 code 5Z6V) as starting point model structure Among them, 9 models ( PDB code: 123 2QH8, 3LFT, 5ER3, 6DSP, 5BRA, 3KSM, 2DRI, 5DTE, 4KZK , 4RS3, 8ABP) with |
| 8 | 4lfy | - | https://tspace.library.utoronto.ca/handle/1807/70867 | STRUCTURE DETERMINATION AND BIOCHEMICAL CHARACTERIZATION OF NOVEL HUMAN UBIQUITIN-LIKE DOMAINS. | 2015 | RS Doherty - 2015 - tspace.library.utoronto.ca | ... Table 3.2: Secondary structure elements of NFATc2IP, ubiquilin-1, ubiquitin and SUMO1/2/3. ...Table 3.4: UIM:ubiquitin complexes deposited in the PDB, along with UIM sequence ... ubiquitin,along with the number of supporting publications and supporting structural complexes that ... |
| 9 | 3oa1 | - | http://smbb.com.mx/congresos%20smbb/guadalajara15/PDF/XVI/trabajos/VIII/VIIIC-27... | Modelado del Monómero de la Fosfoproteína del Virus de la Rabia | 2015 | EMD González, FGB González, JC Basurto… - smbb.com.mx | ... PDB ID Description 1VY1 Dominio del C-Terminal de la polimerasa del virus de la rabia 3OA1Cristal de ... IPN – ESM Bibliografía. 1. Ivanov , I., Crépin, T., Jamin, M., & Ruigrok, RH (10 de Enerode 2010). Structure of the Dimeration Domain of the Rabies Virus Phosphoprotein. ... |
| 10 | 3p96 | - | https://pure.unamur.be/ws/files/51548461/publi_marinum_postprint.pdf | researchportal. unamur. be | 2020 | E Pierson, J Wouters - pure.unamur.be | avium (MavSerB, based on the surrounding residues in PDB structures 5JLR and 5JLP) are The superimposition of MmaSerB2 model with the structures of MavSerB 3P96 and |