We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 8EGM | 2022 | 0 |
| 8EGN | 2022 | 0 |
| 8EK7 | 2022 | 0 |
| 8EWA | 2022 | 0 |
| 8F8U | 2022 | 0 |
| 8FBM | 2023 | 0 |
| 8FI3 | 2022 | 0 |
| 8FI4 | 2022 | 0 |
| 8FI5 | 2022 | 0 |
| 4FK8 | 2012 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 4f4h | - | http://acervodigital.ufpr.br/handle/1884/43806 | Caracterizao de enzima nad sintetase (NADE2) de herbaspirillum seropedicae | 2016 | ARS Santos - 2016 - acervodigital.ufpr.br | ... Outras NAD sintetases de procariotos com domínio glutaminase como a de Cytophaga hutchinsonii (número PDB 3ILV) e Burkholderia thailandensis (número PDB 4F4H), possuem estruturas cristalinas determinadas e depositadas no banco de dados PDB. ... |
| 2 | 5b8i | - | https://www.biorxiv.org/content/10.1101/813717v1.abstract | Biochemical, Biophysical, and Functional Analyses of Two Isoforms of the SnRK2 inhibitor AtSCS | 2019 | K Tarnowski, M Klimecka, A Ciesielski, G Goch, A Kulik- bioRxiv, 2019 - biorxiv.org | 5a, 02-106 Warsaw, Poland 20 2 Warsaw University, Department of Chemistry, Pasteura 1, 02-093 Warsaw, Poland 21 3 The Norwegian Center for Structure Biology, Institute of Chemistry, University of 22 Functional and structural studies showed that PP2Cs 110 |
| 3 | 4iv5 | - | http://www.mdpi.com/1422-0067/16/8/18836/pdf | From Genome to Structure and Back Again: A Family Portrait of the Transcarbamylases | 2015 | D Shi, NM Allewell, M Tuchman - International Journal of Molecular …, 2015 - mdpi.com | ... dodecameric holoenzyme with DHOase, were determined [50,51]. Only one eukaryotic ATCasestructure, of Trypanosoma cruzi, has been determined (PDB code: 4IV5). ... Both domains havean αβα structure with a parallel β-sheet in the center and α helices on both sides. ... |
| 4 | 3p96 | - | http://pubs.acs.org/doi/abs/10.1021/acs.biochem.7b01082 | Regulatory Mechanism of Mycobacterium tuberculosis Phosphoserine Phosphatase SerB2 | 2017 | GA Grant- Biochemistry, 2017 - ACS Publications | figure Figure 1. Ribbon diagram of the structure of M. avium phosphoserine phosphatase (maPSP, Protein Data Bank entry 3p96 ) (right panel). The enzyme is a dimer with each subunit consisting of a catalytic domain (dark |
| 5 | 4o2d | - | http://dx.plos.org/10.1371/journal.pone.0113568.g009 | Biochemical and Structural Characterization of Mycobacterial Aspartyl-tRNA Synthetase AspS, a Promising TB Drug Target | 2014 | SS Gurcha, V Usha, JAG Cox, K Fütterer, KA Abrahams… - PloS one, 2014 - dx.plos.org | ... The corresponding loop in E. coli AspRS is 11 amino acid residues shorter (Figure 7). Anapo-structure of Ms-AspS has recently been deposited in the PDB (entry 4O2D), in which thisloop assumes a very different conformation, forming a 2-turn α-helix and folding back ... |
| 6 | 3swt | - | https://rc.library.uta.edu/uta-ir/handle/10106/29306 | Non-Heme Iron Oxygenases: An Investigation of the Protein Ligand Effects on the Chemical Reactivity in MiaE and Cysteamine Dioxygenases | 2019 | P Palacios - 2019 - rc.library.uta.edu | enzyme toluene monooxygenase in Figure 1.1 (panel B).14 The structural frame of the non-heme iron Figure 1.2 X-ray crystal structure of the Fe(II)/-ketoglutarate dependent enzyme TauD from Myobacterium marinum ( PDB : 3SWT )22 Page 22. 10 |
| 7 | 3svk | - | http://repositoriouba.sisbi.uba.ar/gsdl/collect/masteruba/index/assoc/HWA_812.di... | Bsqueda racional de blancos teraputicos para atacar al bacilo de la tuberculosis en la fase de latencia | 2014 | BIM Kruk, Q Biolgica, UBA de Buenos Aires - repositoriouba.sisbi.uba.ar | ... certain Protein Family (PFAM) sequence homology, for which exists at least one molecularstructure listed in the Protein Data Bank (PDB). Subsequently metabolic and essentialityinformation was considered to classify the lead compounds obtained. Rv0859 3SVK (0.850) fadA Putative acyltransferase... |
| 8 | 3nfw | - | http://www.jbc.org/content/287/31/26213.short | The C-terminal Domain of 4-Hydroxyphenylacetate 3-Hydroxylase from Acinetobacter baumannii Is an Autoinhibitory Domain | 2012 | T Phongsak, J Sucharitakul, K Thotsaporn? - Journal of Biological Chemistry, 2012 - ASBMB | ... Recently, the structure of the reductase of nitrilotriacetate monooxygenase (NTA_MoB; Protein Data Bank code 3NFW) from Mycobacterium thermoresistibile has been reported (43). However, NTA_MoB (189 residues) is smaller than cB from Chelatobacter sp. (335 residues). ... |
| 9 | 3uf8 | - | http://ico2s.org/data/papers/Lee2012c.pdf | An Approximated Voxel Approach for the Identification and Modelling of Ligand-Binding Sites | 2012 | LW Lee, A Bargiela - Journal of Physical Science and Application, 2012 - ico2s.org | ... selected. These proteins are given as [PDB: 1FKF, 1BKF, 1YAT, 3VAW, 3UF8, 1C9H]. ... (a) (b) Fig. 14 (a) Screenshot of FK506-bound protein 3UF8 from the RCSB PDB with ligand site shown, (b) screenshot of the identified site from the voxel-based approximated method. ... |
| 10 | 3qi6 | 3ndn, 3qhx | http://link.springer.com/chapter/10.1007/10_2016_30 | l-Methionine Production | 2016 | J Shim, Y Shin, I Lee, SY Kim - 2016 - Springer | ... 1CS1 [73]) was aligned to MetB of Mycobacterium ulcerans (PDB ID: 3QI6, 3QHX [74 ... jejuni (PDBID:4OC9 [75]), and MetZ of Mycobacterium tuberculosis (PDB ID: 3NDN ... substrate specificity inthese four enzymes is required to establish detailed structurefunction relationships. ... |