We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 7TM5 | 2022 | 0 |
| 7TM4 | 2022 | 0 |
| 7TM0 | 2022 | 0 |
| 7TLZ | 2022 | 0 |
| 7TLY | 2022 | 0 |
| 7K5Z | 2020 | 0 |
| 7K68 | 2021 | 0 |
| 7K69 | 2021 | 0 |
| 7K72 | 2020 | 0 |
| 7KF3 | 2020 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3laa | - | http://archive.hshsl.umaryland.edu/handle/10713/3641 | Functional Analysis of the Polymorphic Membrane Protein Family of Chlamydia | 2013 | V Grinblat-Huse - 2013 - archive.hshsl.umaryland.edu | ... The trimeric autotransporter adhesin head domain [RCSB indentifier 3LAA] from Burkholderia pseudomallei and the outer membrane adhesin/invasin [RCSB identifier 1K24] from Neisseria meningitidis were also used to attempt a structure prediction ... |
| 2 | 3ngj | - | http://www.jbc.org/content/295/2/597.short | Rational engineering of 2-deoxyribose-5-phosphate aldolases for the biosynthesis of (R)-1, 3-butanediol | 2020 | T Kim, PJ Stogios, AN Khusnutdinova, K Nemr- Journal of Biological, 2020 - ASBMB | DERA structures as the best matches, including the Entamoeba histolytica DeoC ( PDB code 3NGJ ; Z score RMSD, 0.6 ; 66% sequence identity), and L. brevis DERA E78K mutant ( PDB code 4XBS; Z Based on the BH1352 structure , its active site is located inside of the -barrel |
| 3 | 4g6z | 4gri | http://www.biomedcentral.com/1471-2148/14/26/ | Evolutionary insights about bacterial GlxRS from whole genome analyses: is GluRS2 a chimera? | 2014 | S Dasgupta, G Basu - BMC evolutionary biology, 2014 - biomedcentral.com | ... The structure shown on the left corresponds to the crystal structure of T. thermophilus GluRS (pdb ID: 1j09) with residues 1-322 and 323-468 comprising the N- and the C-terminal domains, respectively. Is GluRS2 a chimera? ... |
| 4 | 3r1i | - | http://www.jbc.org/content/early/2019/06/17/jbc.RA119.009390.short | Structural and biochemical characterization of 20-hydroxysteroid dehydrogenase from Bifidobacterium adolescentis strain L2-32 | 2019 | HL Doden, RM Pollet, SM Mythen, Z Wawrzak- Journal of Biological, 2019 - ASBMB | replacement with the structure of an SDR from Mycobacterium marinum ( PDB : 3R1I ) and refined indicate these alanine substitutions did not sig- nificantly affect secondary structural elements (Fig extended N-terminus is important for second- ary and quaternary structure In both |
| 5 | 6bfu | - | https://jvi.asm.org/content/early/2021/01/06/JVI.02284-20.abstract | Insight into vaccine development for Alpha-coronaviruses based on structural and immunological analyses of spike proteins | 2021 | Y Shi, J Shi, L Sun, Y Tan, G Wang, F Guo- Journal of, 2021 - Am Soc Microbiol | recognition pattern, especially the structure of the RBD and its state in the S-trimer, 112 Structural and immunological analyses of alpha- and beta-coronaviruses spike 124 proteins 125 To date, multiple S-trimer structures of coronaviruses have been resolved (12-14, 126 |
| 6 | 3tzs | 3tf6 | http://www.pnas.org/content/early/2015/07/30/1508902112.short | Siderocalin-mediated recognition, sensitization, and cellular uptake of actinides | 2015 | BE Allred, PB Rupert, SS Gauny… - Proceedings of the …, 2015 - National Acad Sciences | ... molecules from available crystal structures (the structures described in this work plus PDB (41)accession ... 1 × 8U, 3FW4, 3FW5, 3HWE, 3HWF, 3HWG, 3K3L, 3PEC, 3PED, 3TF6, 3TZS, 3UOD,and ... of key calyx residues, colored as in H, isolated from the 73-structure superposition ... |
| 7 | 3js4 | - | http://escholarship.org/uc/item/2t44h65b.pdf | Highly Active Yeast MnSOD has a Novel Mechanism Involving Six-coordinate Mn (3+) Species | 2012 | Y Sheng - 2012 - escholarship.org | ... The enzyme structures of four classes of SOD. (A) Homo sapien CuZnSOD (pdb code: 1PU0); (B) Streptomyces coelicolor NiSOD (pdb code: 1T6U); (C) Saccharomyces cerevisiae MnSOD (pdb code: 3LSU); (D) Anaplasma phagocytophilum FeSOD (pdb code: 3JS4). Page 22. ... |
| 8 | 4ex4 | - | http://pubs.acs.org/doi/abs/10.1021/acs.biochem.7b00852 | Structural and Functional Characterization of Malate Synthase G from Opportunistic Pathogen Pseudomonas aeruginosa | 2017 | AC McVey, P Medarametla, X Chee, S Bartlett- Biochemistry, 2017 - ACS Publications | ... G. Inactivation of these enzymes has been reported to abolish the ability of P. aeruginosa to establish infection in a mammalian model system, yet we still lack the structural information to support drug design efforts. In this work, we describe the first X-ray crystal structure of P ... |
| 9 | 3v2i | 4dz4, 4f3y | http://scjournal.ius.edu.ba/index.php/scjournal/article/view/152 | A Computational Biology Approach in Function Annotation to Enzymes | 2018 | M Ljubijankic- Southeast Europe Journal of Soft Computing, 2018 - scjournal.ius.edu.ba | 3.5.3.1 2Q47 3.1.1.3 3.1.3.48 3SF8 3.1.6. 3.4.-.- 3V2I 3.4.19.12 3.1.1.29 is observed in the example of the survival protein E (SurE) from Thermotogamaritima ( PDB ID 1ilv). Zhang and colleagues (2001) determined the crystal structure of this protein and in their work, described it |
| 10 | 4ggq | - | http://search.proquest.com/openview/219528695acb361301dd8d5055c2fd4a/1?pq-origsi... | Structural studies of the mechanism by which Bcl-2 and Beclin proteins regulate autophagy and apoptosis | 2016 | M Su - 2016 - search.proquest.com | ... Amongst nearly 120000 structures deposited in the Protein Data Bank ( PDB ) to date, 107000 are X-ray ... of left-handed and right-handed circularly polarized light, is often used to investigate structural aspects of ... CD can be used to determine the secondary structure of proteins. ...The atomic structures of MBP (extracted from PDB code 4GGQ), SUMO (extracted from PDB code 1L2N) and Beclin 2:Atg14 |