We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 8CSO | 2022 | 0 |
| 7V0H | 2022 | 0 |
| 7USB | 2022 | 0 |
| 7US9 | 2022 | 0 |
| 7US6 | 2022 | 0 |
| 7UME | 2022 | 0 |
| 4MI2 | 2013 | 0 |
| 7UMD | 2022 | 0 |
| 4MG4 | 2013 | 0 |
| 9ZK1 | 2025 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 6q05 | - | https://www.journal.atmph-specialissues.org/uploads/179/8422_pdf.pdf | A Review of Current Literature on sudden Upsurge of COVID-19 | 2020 | R Sharma- Annals of Tropical Medicine and Public, 2020 - journal.atmph-specialissues.org | 6Q05 MERSCoV S structure in complex with SialylLewis Available from: http://www.rcsb.org/ pdb /results/results.do?tabtoshow=Unreleased and qrid=7E90BED0 coronavirus papain-like novel protease inhibitors: Design, synthesis, protein-ligand X-ray structure and biological |
| 2 | 3i4e | - | https://www.biorxiv.org/content/early/2018/05/09/318345.short | Three enzymes and one substrate; regulation of flux through the glyoxylate shunt in the opportunistic pathogen, Pseudomonas aeruginosa. | 2018 | AL Crousilles, SK Dolan, P Brear, DY Chirgadze- bioRxiv, 2018 - biorxiv.org | IDH active site architecture with that of ICD in the AceK-ICD complex from E. coli ( PDB ; 3LCB) reveals that X-ray Diffraction, Structure Determination, and Refinement ICL, IDH and ICD were solved using the structural templates 3I4E (to be published), 4ZDA (to be published) and |
| 3 | 4xgi | - | http://onlinelibrary.wiley.com/doi/10.1002/biot.201700305/full | Discovery of a Potentially New Subfamily of ELFV Dehydrogenases Effective for lArginine Deamination by Enzyme Mining | 2017 | W Wu, Y Zhang, J Huang, Y Wu, D Liu- Biotechnology, 2017 - Wiley Online Library | Active site of glutamate dehydrogenase ( PDB 4XGI ) (A), phenylalanine dehydrogenase ( PDB 1BW9) (B), valine dehydrogenase ( PDB 1LEH) (C Phenylalanine was inserted into the active site of valine dehydrogenase (C) by structure alignment of 1BW9 and |
| 4 | 4qfh | - | http://repositorio.unicamp.br/handle/REPOSIP/332683 | Identificao e caracterizao de inibidores da enzima glicose-6-fosfato isomerase de Leishmania mexicana | 2018 | SGR Mota - 2018 - repositorio.unicamp.br | A computational analysis of cavities present on LmPGI crystallographic structure suggests a potential binding site for the inhibitors PBS Phosphate Buffer Solution PDB Protein Data Bank SSGCID Seattle Structural Genomics Center for Infectious Diseases |
| 5 | 4gl8 | - | https://kuscholarworks.ku.edu/handle/1808/25891 | INVESTIGATION OF THE LIPOPROTEOME OF THE LYME DISEASE BACTERIUM BORRELIA BURGDORFERI | 2017 | AS Dowdell - 2017 - kuscholarworks.ku.edu | lipoproteins, such as OspA (88, 89). Structural analysis of Lp6.6 showed that it exists primarily in aggregation-prone -helices and disordered stretches, and it is hypothesized that its unconstrained tertiary structure may be important for its biological role (90). Another similarly |
| 6 | 7skz | 7sl5 | https://www.research-collection.ethz.ch/entities/publication/05860c88-0378-4184-... | Isolation and Characterization of Broadly Neutralizing Antibodies to Coronaviruses | 2022 | J Jerak - 2022 - research-collection.ethz.ch | -specific structural differences might affect the accessibility of this immunogenic site. Structure (C) Crystal structure of trimeric prefusion stabilized SARS-CoV-2 ( PDB 6VSB 45) with S1 |
| 7 | 3rrp | 3r9q | https://www.mdpi.com/1422-0067/27/13/5789 | Deferoxamine Exhibits Antimicrobial and Immunomodulatory Activity Against Mycobacterium abscessus: Integrated In Silico and In Vitro Evidence | 2026 | RLS Lira, FB Mendes, PLBT Roxo- International Journal of, 2026 - mdpi.com | associated with immunocompromised individuals, these microorganisms can also cause disease in susceptible immunocompetent hosts, particularly in the presence of structural lung... Molecular docking profiles within the binding sites of: c) fumarase (PDB ID: 3RRP); |
| 8 | 3f0d | 3mx6 | https://search.proquest.com/openview/9fc8f0354d4ba3af48825fe7f30af8ee/1?pq-origs... | Identification of Rickettsia Prowazekii Methionine aminopeptidase Inhibitors and Development of Thermal Shift assays for Burkholderia Pseudomallei Ispf and Sars | 2023 | I Sharma - 2023 - search.proquest.com | (Figure 1.12) reveals the `pita-bread' fold with a large cavity primarily formed by the inner surface of the central betabarrel ( PDB ID: 3MX6).This cavity holds the active site (Figure 1.17A); |
| 9 | 3md7 | 3r1i, 3oce, 3mx6, 3oca, 3r1j, 3o0m, 3r4t, 3r6f, 3omf | https://pubs.acs.org/doi/abs/10.1021/acs.jcim.6c00352 | Assessing Metal Ion Assignment Accuracy in Protein Data Bank Models via Elemental Spectroscopy | 2026 | EH Snell, GW Grime, SM Webb, C Costa- Journal of Chemical, 2026 - ACS Publications | We find that in a majority of cases, the metals modeled in the corresponding PDB entries data integrity issue in deposited macromolecular structures , PDB -wide. These results establish |
| 10 | 3rd5 | - | http://search.proquest.com/openview/3456a0f162d24a094672122e01905158/1?pq-origsi... | Mechanistic Studies on the Light-Dependent NADPH: Protochlorophyllide Oxidoreductase and Animal Cryptochromes | 2018 | N Archipowa - 2018 - search.proquest.com | a C15-E-anti-configuration as shown in Figure 1.4A [8]. This is followed by formation. of several thermally activated intermediates comprising structural changes of the POR. Crystal structure of the NB-protein catalytic site ( PDB : 3AEK [32]). The |