SSGCID
Seattle Structural Genomics Center for Infectious Disease

Cited Structures: list of articles citing SSGCID structures

We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.

This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.

Cited structures

Manually reviewed citations

# PDB Additional SSGCID structures cited Link Title Year Citation Highlighted abstract
1 5vmk 4eqy https://discovery.ucl.ac.uk/id/eprint/10080778/ Mechanistic characterisation and inhibitor identification of Mycobacterium tuberculosis bifunctional N-acetyltransferase/uridylyltransferase GlmU 2019 PD Craggs - 2019 - discovery.ucl.ac.uk that has contributed to the success of this pathogenic over the last thousand years. Peptidoglycan is a unique and essential structural element that provides much of the Structure of UDP-GlcN Table 7. Published GlmU structures in the Protein Data Bank ( pdb ) ....70
2 5b8f 3qxz, 3i3f https://scholarworks.iupui.edu/handle/1805/13161 Analysis of Pseudo-Symmetry in Protein Oligomers and its Correlation with Protein Dynamics 2017 K Shankar - 2017 - scholarworks.iupui.edu ... In fig.5.1, the protein with pdb code 1e9g is used to illustrate the structures generated to achievethe calculation. ... Fig. 5.2.: Structure Index in dimer 1e9g: Structural alignment of chain A with chainB generates A and chain B with A generates B. The difference between newly ...
3 3slg 3swo, 3tk8, 4dz4, 5dle, 4lgo, 3t3w, 5bq2, 4lgv, 3l0g, 5kak, 4ghk, 3ld9, 5w15, 4q1t, 5udf, 4pca, 3hm0, 3inn, 3dah, 3i3f https://link.springer.com/content/pdf/10.1007/978-981-10-7347-2.pdf#page=84 5.1 Creation of Homo Multimer Protein Complex Dataset 2018 P Kangueane, C Nilofer- Protein-Protein and Domain-Domain Interactions - Springer 3LYU, 3M1R, 3MBH, 3MQ1, 3MW9, 3N2N, 3NWY, 3OVG, 3OZB, 3PW3, 3SBA, 3SLG , 3T3W, 3T94 Distribution of homo multimer protein complex structures at the protein data bank ( PDB ) 5.3 Structure of a homo trimer glycosidase (1AM7) from enterobacteria phage lambda is
4 3mqd - https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/vx02... Exploring Protein Structure: Seeing the Forest and the Trees 2017 AE Brereton - 2017 - ir.library.oregonstate.edu Experimental Methods to Obtain Structures Only a few experimental methods exist that can yield enough information to accurately determine the 3-dimensional structure of a folded protein complete structural information often comes from using a combination of the methods
5 3o0m 3oj7, 3r6f, 3lb5 https://udspace.udel.edu/items/40e2c554-f9dc-43a9-bb93-b6dd5914e73c Potential Binding Partners of cADPR and cADPR isomers in the Thoeris Phage Defense System 2023 N Bomasamudram - 2023 - udspace.udel.edu structures , and they differ based on their Cterminus. The structures of categorized Hint structures hydrocarbonoclasticus (3OHE), and Mycolicibacterium smegmatis ( 3O0M ). Type III Hint
6 3o0m 3oj7 https://papers.ssrn.com/sol3/papers.cfm?abstract_id=5273447 Biochemical and Biophysical Characterization, and 3d Structure Modeling of Human Hint3, a Hydrolase of the Hit Superfamily 2025 R Dolot, M Sirerant, A Mikoajczyk- Available at SSRN - papers.ssrn.com Structure modelling of the HINT3 (Gly36) variant revealed that the enzyme exists mainly in absent in the structures of HINT1 and HINT2. Analysis of the HINT3 structure shows that there... In a first attempt, a homology model for HINT3 was generated based on eight crystallographic structures with the PDB IDs: 5UVM, 6D6J, 6CVS, 3OJ7, 3O0M, 4INC, 3TW2, and 3O1Z (see Table S2) using the MODELLER 10.5 software.
7 2khp - http://rave.ohiolink.edu/etdc/view?acc_num=akron1524681449524557 NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY IN THE STUDY OF PROTEIN-LIGAND INTERACTIONS 2018 DL Morris - 2018 - rave.ohiolink.edu Structures of target proteins were obtained from the Protein Data Bank (PDB). The PBD code for BrmGRX is 2KHP and hGRX1 is 1JHB.
8 6n41 - https://repositorio.unal.edu.co/handle/unal/85425 Anlisis computacional de la hemaglutinina de los virus influenza A de linaje pandmico en Colombia 2023 JA suga Restrepo - repositorio.unal.edu.co The last two chapters corresponded to the structural analysis of HA and its interaction with ), representative of its cluster, showed structural changes in the loop130 of receptor binding
9 3laa - https://arxiv.org/abs/2411.03112 Multiscale differential geometry learning for protein flexibility analysis 2024 H Feng, JY Zhao, GW Wei- arXiv preprint arXiv:2411.03112, 2024 - arxiv.org Each PDB structure includes a set of global features, such as PDB files. Local features for each protein include packing density, amino acid type, occupancy, and secondary structure
10 3o0h - https://core.ac.uk/download/pdf/85124980.pdf Structural analysis of protein-small molecule interactions by a crystallographic and spectroscopic approach 2017 R Fagiewicz - 2017 - core.ac.uk Uniprot and/or PDB database. In green is highlighted best identity of available biocrystallography reached the mature age and transformed into structural biology. doing extensive work in the structure determination by employing more and more advanced technologies