We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 5SDA | 2022 | 0 |
| 5SD9 | 2022 | 0 |
| 5SD8 | 2022 | 0 |
| 5SD7 | 2022 | 0 |
| 5SD6 | 2022 | 0 |
| 5SD5 | 2022 | 0 |
| 5SD4 | 2022 | 0 |
| 5SD3 | 2022 | 0 |
| 5SD2 | 2022 | 0 |
| 5SD1 | 2022 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3rd5 | - | http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4213187/ | Comparative Study on Sequence–Structure–Function Relationship of the Human Short-chain Dehydrogenases/Reductases Protein Family | 2014 | NTN Tang, L Le - Evolutionary bioinformatics online, 2014 - ncbi.nlm.nih.gov | ... structures within each group were compared with each other and the selected structure was the ...GROUPS, PDB CODE AND NAME OF REPRESENTATIVE STRUCTURES. ... 4, 3rd5 chain A, aputative uncharacterized oxidoreductase protein from Mycobacterium Paratuberculosis. ... |
| 2 | 4npc | - | https://www.ingentaconnect.com/contentone/govi/pharmaz/2019/00000074/00000002/ar... | Synthesis and antibacterial activity of novel icariin derivatives | 2019 | A Wang, Y Xu- Die Pharmazie-An International Journal of, 2019 - ingentaconnect.com | The X-ray structure of MetAP1 ( PDB : 4npc ) was also obtained from Protein Databank ( PDB ). Before going to the docking procedure, the protein structure was prepared using the Protein preparation wizard of the DS 2017 R2 |
| 3 | 6wpt | - | https://www.ncbi.nlm.nih.gov/pmc/articles/pmc8144490/ | Synthesis and cytotoxic activity of novel Indole derivatives and their in silico screening on spike glycoprotein of SARS-CoV-2 | 2021 | P Gobinath, DA Ponnusamy Packialakshmi- Frontiers in molecular, 2021 - ncbi.nlm.nih.gov | molecular protein crystal structure of spike glycoprotein of SARS-CoV-2 PDB ID 6WPT The ligand preparation module optimized the ligand 3D structure of selected molecules to remove molecular interaction analysis with selected small molecules of (1c) with 6WPT protein was |
| 4 | 3oc6 | - | http://www.mdpi.com/1422-0067/19/9/2518 | Biochemical Characterization and Structural Modeling of Fused Glucose-6-Phosphate Dehydrogenase-Phosphogluconolactonase from Giardia lamblia | 2018 | L Morales-Luna, H Serrano-Posada- International journal of, 2018 - mdpi.com | Recent Trends and Applications of Molecular Modeling in GPCRLigand Recognition and Structure -Based Drug Design. Choose your preferred view mode Giardia lamblia. G6PD. purification. recombinant expression. bioinformatics analysis. three-dimensional structure |
| 5 | 2kok | - | https://core.ac.uk/download/pdf/288178756.pdf | AMPLIFICAO E CLONAGEM DO GENE draB de Azospirillum brasilense | 2017 | F Pinhelli - core.ac.uk | melhor proteína-molde para o modelamento de DraB uma Arsenato redutase (arsC) de Brucella melitensis, cujo o número de acesso ao PDB é Bm-YffB ou 2kok. Elas possuem 23% de identidade, |
| 6 | 3p10 | - | http://commons.lib.niu.edu/handle/10843/17504 | Characterization of The Binding Thermodynamics of Metal Cofactors to Burkholderia pseudomallei IspF | 2017 | KT Do - 2017 - commons.lib.niu.edu | ... catalytic function. Figure 1: Crystal structure of Burkholderia pseudomallei IspF (PDB: 3P10).Yellow spheres indicate catalytic Zinc ions. Page 7. The ... cyan). A single protein crystalstructure (PDB ID: 3P10) is, depicted for clarity. Key interactions ... |
| 7 | 3tl6 | - | https://link.springer.com/chapter/10.1007/978-3-319-23497-7_13 | Basic Exploratory Proteins Analysis with Statistical Methods Applied on Structural Features | 2015 | E Del Prete, S Dotolo, A Marabotti- Mathematical Models in, 2015 - Springer | 1JP7, 1M73, 1ODK, 1PK9, 1QE5, 1TCU, 1V4N, 1VMK, 1XE3, 1Z33, 2P4S, 3KHS, 3OZE, 3SCZ, 3TL6 , 3UAV, 4D98 2. Different online and local tools have been used to extract protein structural properties from PDB files: Vadar [15], for secondary structure (also confirmed |
| 8 | 4ed9 | - | http://broncoscholar.library.cpp.edu/handle/10211.3/215321 | Overexpression and Purification of the Protein BaiK for Structural Characterization by X-Ray Crystallography | 2020 | S Khuu - 2020 - broncoscholar.library.cpp.edu | Initially , BaiK was overexpressed to produce large quantity of protein for use in structural and structure being very similar to histidine while also being added at a high concentration. 11 formation of more ordered crystal structures . The effective concentration of the protein |
| 9 | 2mj3 | - | https://scholarship.rice.edu/handle/1911/108341 | Understanding and modulating electron transfer through ferredoxins | 2020 | I Campbell - 2020 - scholarship.rice.edu | 3.6. Cyanophage Fd structural characterization ..... 79 This bioinformatic study highlights understudied PECs whose structure , stability, and partner specificity should be further characterized... 1UWM, 1PDX, 1M2D, 1I7H, 3AH7, 2MJD, 2MJ3, 2Y5C, 5FFI, 3P1M, 1E0Z, 1DOI |
| 10 | 5VOG | - | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7674647/ | Structural analysis of (p) ppGpp reveals its versatile binding pattern for diverse types of target proteins | 2020 | GS Kushwaha, A Patra, NS Bhavesh- Frontiers in microbiology, 2020 - ncbi.nlm.nih.gov | Although, glycosidic bond and ribose sugar in the nucleotide structure exhibit conformational flexibility and classical molecular dynamics simulation on nucleotides is S.No, Macromolecule Name, Resolution (), PDB ID 14, Putative phosphoribosyltransferase, 1.50, 5VOG |