SSGCID
Seattle Structural Genomics Center for Infectious Disease

Cited Structures: list of articles citing SSGCID structures

We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.

This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.

Cited structures

Manually reviewed citations

# PDB Additional SSGCID structures cited Link Title Year Citation Highlighted abstract
1 5k85 5u29 https://aaltodoc.aalto.fi/items/ef5fbad3-e949-4f46-8925-8ec058ca3b0b Investigating the substrate promiscuity of acetyl-CoA synthetase from A. ethanivorans through a structural approach 2025 M Nikkanen - 2025 - aaltodoc.aalto.fi Analogous and similarly spatially aligned residues residues seem to have the same function in Acs structures with PDB accession numbers 5u29 and 5k85 (figure 3) [27].
2 3o0m - https://edoc.ub.uni-muenchen.de/21623/ Evolutionary coupling methods in de novo protein structure prediction 2016 S Seemayer - 2016 - edoc.ub.uni-muenchen.de On homomeric proteins, intermolecular couplings (red) have to be disentangled from intramolecular couplings (yellow) for de novo structure prediction to succeed (representative contacts mapped on PDB code 3O0M)
3 5vwm 6ote, 6pth, 6cfp https://papers.ssrn.com/sol3/papers.cfm?abstract_id=4633401 Unveiling Success Determinants for Amb-Assisted Phase Expansion of Fusion Proteins in Arp/Warp 2023 MC Cardona-Echavarra, C Santilln - papers.ssrn.com In this study, the PDB was mined to obtain an up-to-date list of the FP crystallographic 103 structures of the most used protein tags: maltose binding protein (MBP), thioredoxin (TRX),
4 3k9g 3s6l, 3oib, 3km3, 3njb, 3o2e https://scripts.iucr.org/cgi-bin/paper?nz5010 Multivariate estimation of substructure amplitudes for a single-wavelength anomalous diffraction experiment 2023 NS Pannu, P Skubk- Acta Crystallographica Section D: Structural, 2023 - scripts.iucr.org The model-building performance is judged by the fraction of the PDB -deposited model backbone that is `correctly built'. A residue is considered to be correctly built if its C position is at
5 3oa1 - https://edoc.ub.uni-muenchen.de/23348/1/Wachowius_Marco.pdf The rabies virus phosphoprotein: novel targets and functions involved in interferon antagonism 2016 M Wachowius - 2016 - edoc.ub.uni-muenchen.de After attachment to the extracellular target structure Structural data available for the dimerization domain ( PDB ID 3L32) and C- terminal domain ( PDB ID 3OA1 ) were visualized with Cn3D software by NCBI B) Overview over the RABV P trafficking signals
6 5dld 4hwg https://www.teses.usp.br/teses/disponiveis/76/76132/tde-29092020-091852/en.php UDP-N-acetilglicosamina 2-epimerase de Staphylococcus aureus: estrutura, dinmica e prospeco de novos ligantes 2020 C Azevedo - teses.usp.br the crystallographic structure of the enzyme to characterize conformational changes as they 45 Figura 13 Estrutura cristalogrfica da cadeia A da protena UDP-GlcNac 2-epimerase de S. aureus ( PDB : 5ENZ), com uma molcula de UDP em stio ativo, vista de frente (A) e
7 3l56 3khw, 3r2v https://tel.archives-ouvertes.fr/tel-01485269/ Dynamique structurale et fonctionnelle du domaine C-terminal de la protine PB2 du virus de la grippe A 2015 E Delaforge - 2015 - tel.archives-ouvertes.fr ...Superposition des structures du 627-NLS de différentes souches sur 2VY6 en gris. A/little yellow-shouldered bat/Guatemala/060/2010 (H17N10) PDB 4WSB (vert), A/mexico/indre4487/2009 (H1N1) PDB 3KHW (orange), A/vietnam/1203/2004 (H5N1) PDB 3L56 (rose), A/Yokohama/2017/03 PDB 3R2V (H3N2) (bleu), ...
8 3hhj 4dyw http://repositorio.udec.cl/handle/11594/1006 Asociacin de genes nudA y htrA de Helicobacter pylori con severidad de patologas gstricas, estudio bioinformtico de la protena NudA. 2019 PA Lincoir Campos - 2019 - repositorio.udec.cl Page 1. Universidad de Concepcin Direccin de Postgrado Facultad de Ciencias Biolgicas - Programa de Magister en Ciencias con Mencin en Microbiologa Asociacin de genes nudA y htrA de Helicobacter pylori con severidad de patologas gstricas
9 6uld - https://pubs.acs.org/doi/abs/10.1021/acsinfecdis.5c00996 The Pyridoxal-5-Phosphate-Dependent Enzymes of Mycobacterium tuberculosis 2026 A Peracchi, B Baker- ACS Infectious Diseases, 2026 - ACS Publications from the PDB database (sequences derived from structural studies). Initially this search yielded 87 hits, many of which, however, were not pertinent (such as enzymes involved in the
10 4wxt 5uth https://repositorio.unesp.br/handle/11449/152293 Mecanismo de ao e infeco por Corynebacterium pseudotuberculosis: expresso, purificao e caracterizao de protenas relacionadas ao metabolismo central 2017 LA Kawai - 2017 - repositorio.unesp.br Page 9. PBS: Tampo fosfato contendo NaCl PDB : Protein Data Bank RMN: Ressonncia Magntica Nuclear Corynebacterium pseudotuberculosis: Role of Electrostatic Forces in the Stability of the Secondary Structure , minha contribuio foi realizada na reviso final, onde