We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 3OIB | 2010 | 6 |
| 3S55 | 2011 | 6 |
| 3OQ8 | 2010 | 6 |
| 3I3F | 2009 | 6 |
| 4NI5 | 2013 | 6 |
| 6D8W | 2018 | 6 |
| 4WHX | 2014 | 6 |
| 3KJR | 2009 | 6 |
| 6NB4 | 2019 | 6 |
| 6VEL | 2020 | 6 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 5deo | - | https://pubs.acs.org/doi/abs/10.1021/acschembio.9b00124 | Novel antimycobacterial compounds suppress NAD biogenesis by targeting a unique pocket of NaMN adenylyltransferase | 2019 | AL Osterman, I Rodionova, X Li, E Sergienko- ACS chemical, 2019 - ACS Publications | ADVERTISEMENT. Log In Register. Cart. ACS; ACS Publications; C&EN; CAS. ACS Publications: ACS Journals; ACS eBooks; C&EN Global Enterprise. A; Accounts of Chemical Research; ACS Applied Bio Materials; ACS Applied Electronic |
| 2 | 3m4s | - | https://www.nature.com/articles/srep30494 | Crystal structures of RidA, an important enzyme for the prevention of toxic side products | 2016 | X Liu, J Zeng, X Chen, W Xie- Scientific reports, 2016 - nature.com | 2DYY, dirty violet), and Entamoeba histolytica l-PSP ( PDB code 3M4S , gray) respectively unpublished), and a putative endoribonuclease l-PSP from Entamoeba histolytica ( PDB code3M4S, unpublished AtRidA is highly similar to other RidA family members in structure , and their |
| 3 | 5umh | 5vxt | https://www.sciencedirect.com/science/article/pii/S0965174818303643 | Structural and functional characterization of an intradiol ring-cleavage dioxygenase from the polyphagous spider mite herbivore Tetranychus urticae Koch | 2018 | CR Schlachter, L Daneshian, J Amaya- Insect biochemistry and, 2018 - Elsevier | Here, we have determined the spectroscopic, structural and metabolic properties of TuIDRCD, the first arthropod ID-RCD used for determination, refinement, and validation of mTuIDRCD structure ; however, in this case the structure of mbp-(t48)TuIDRCD ( PDB code: 5VG2 |
| 4 | 3rqi | - | http://dx.plos.org/10.1371/journal.pone.0024173 | Phosphorylation alters the interaction of the Arabidopsis phosphotransfer protein AHP1 with its sensor kinase ETR1 | 2011 | B Scharein, G Groth - PloS one, 2011 - dx.plos.org | ... form. A homology model of AHP1 built on the crystal structure of the Hpt protein OsHP1 from rice (PDB code 1YVI) which is shown in Figure 5 further supports our experimental data that AHP1 forms homodimers in solution. The ... |
| 5 | 3laa | - | http://www.sciencedirect.com/science/article/pii/S1438422114001696 | A domain dictionary of trimeric autotransporter adhesins | 2014 | J Bassler, BH Alvarez, MD Hartmann… - International Journal of …, 2014 - Elsevier | ... Name, Description, Topological crossover, PDB. Anchor, Trimeric, 12-stranded outermembrane β-barrel, –, 2gr7. Stalk, Slender segment of predominantly coiled-coil structure, –, ...Long neck, Neck variant of 22 residues length, 120° cw, 3laa. ... |
| 6 | 3eiy | - | https://arxiv.org/abs/2012.05716 | Utilising Graph Machine Learning within Drug Discovery and Development | 2020 | T Gaudelet, B Day, AR Jamasb, J Soman- arXiv preprint arXiv, 2020 - arxiv.org | and evolve along a temporal dimension resulting in changes to composition, structure and attributes One such approach is to use a graph's structural information to regularise embeddings authors suggest the atten- tion mechanism is decoupled from the architecture and should |
| 7 | 5elo | 6c86, 5vl1, 6aqg | https://onlinelibrary.wiley.com/doi/abs/10.1002/prot.25699 | Side chain rotameric changes and backbone dynamics enable specific cladosporin binding in Plasmodium falciparum lysyltRNA synthetase | 2019 | J ChhibberGoel, A Sharma- Proteins: Structure, Function, and, 2019 - Wiley Online Library | ( PDB : apo 6C86, holo 5ELO ) and M. ulcerans (MuKRS) ( PDB : apo 5VL1, holo re-arrangements and are noted as 1 to 4 for all the four PDB data sets (Table 1 and Fig. 1). In based on structural analyses. Our analyses also provide a platform for structure -guided |
| 8 | 5vp5 | 3enn | https://www.nature.com/articles/s41598-021-86400-1 | Insights into Acinetobacter baumannii fatty acid synthesis 3-oxoacyl-ACP reductases | 2021 | EM Cross, FG Adams, JK Waters, D Arago- Scientific reports, 2021 - nature.com | Treatments for 'superbug' infections are the focus for innovative research, as drug resistance threatens human health and medical practices globally. In particular, Acinetobacter baumannii (Ab) infections are repeatedly reported as difficult to treat due to increasing antibiotic resistance |
| 9 | 6tys | - | https://www.mdpi.com/1999-4915/12/3/342 | Structural insight into paramyxovirus and pneumovirus entry inhibition | 2020 | M Aggarwal, RK Plemper- Viruses, 2020 - mdpi.com | 19,20,21] have furthermore created a novel opportunity for structure -informed mechanistic Structural information is very limited compared to that available for the paramyxovirus attachment Consequently, crystal structures of prefusion PIV5 and NiV F ectodomains could only be |
| 10 | 3rrp | - | https://www.sciencedirect.com/science/article/pii/S0141022918302370 | Enhancing the thermostability of fumarase C from Corynebacterium glutamicum via molecular modification | 2018 | L Lin, Y Wang, M Wu, L Zhu, L Yang, J Lin- Enzyme and microbial, 2018 - Elsevier | The modeled structure of cgFumC was completed through homology modeling with the Swiss-Model server by using the crystal structure of the fumarate hydratase Fum ( PDB ID: 3RRP ) from Mycobacterium abscessus as a template, which shares a 75.76% sequence |